Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0426 |
Symbol | |
ID | 8322485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 426272 |
End bp | 427210 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644951578 |
Product | DNA-directed RNA polymerase, alpha subunit |
Protein accession | YP_003109067 |
Protein GI | 256371243 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGTCA TGCAACGCCC CACGGTCGAG TCGCTCGGTG ACGAGGTCGA CAATCGTCAA CGGTTCGCCA TCGGACCACT CGAGCCAGGG TTCGGCCACT CGATCGGGAA CGCGCTGCGG CGTGTGCTCA TCTCGTCGGT CCCGGGCGCG GCCATCACGC AGGTCCGTTT CGATGATGCG CTGCACGAGT TCACGACGAT CCCCGGGGTG AAGGAAGATG TGATCGACAT CATCTTGAAC CTCAAGGACA TCGTGTGGCG TTCGTGGAGT GAAGAGCCGG TCACGGTGAG GCTCGACGTT CGTGGCCCCA AGGAGGTCAC GGCGGGAGAC TTCATGCTCC CCTCCGACGT GGAGGTCATC AACCGCGATC TCCATATCGC TTCGGTGTCG GAGCACGGTC GGTTGGGTCT CGATGCGGTG GTCGAGCAGG GGCGCGGCTA CGTGTCGGCG GAGGGCAACA AGCGCACCAC CACCATCGGC ATCATCGCGA TCGACGCGAT CTTCTCCCCT GTGCGTCACG TCAACTACCG CGTCGAGCCG GTTCGTGTCG GTCAGTCGAC GGACTTCGAC CAGGTGGTGC TGGAGGTCGA GACCGATGGC TCCGTGACGC CACGGGAGGC CGTCGCCTCT GCGGCCCGGA CGCTCACCAG CTTGTTCGGC CTCGTCGCCG AGCTCGCGAC CGACGTCAAT GCGCTCGAGG TCGCCGCGAC CGCCGACGAC AGCGTGCGAC CGGCCGAGTA CGACCTCCCC ATCGAGGAAC TCGAGCTCAC GGAGCGGCCG CGGAACTGCT TGAAGCGGGC GAGCATCAAC ACCATCGGTG ATCTGGTCGA GCGCACCCCT GAGGATCTGT TGTCGATCAC GAACTTCGGC CAGAAGTCGC TCGACGAGGT CGTCGAGCGC TTGACCCAGC GCGGACTTGA GTTGAGGAAG AGGGACTGA
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Protein sequence | MLVMQRPTVE SLGDEVDNRQ RFAIGPLEPG FGHSIGNALR RVLISSVPGA AITQVRFDDA LHEFTTIPGV KEDVIDIILN LKDIVWRSWS EEPVTVRLDV RGPKEVTAGD FMLPSDVEVI NRDLHIASVS EHGRLGLDAV VEQGRGYVSA EGNKRTTTIG IIAIDAIFSP VRHVNYRVEP VRVGQSTDFD QVVLEVETDG SVTPREAVAS AARTLTSLFG LVAELATDVN ALEVAATADD SVRPAEYDLP IEELELTERP RNCLKRASIN TIGDLVERTP EDLLSITNFG QKSLDEVVER LTQRGLELRK RD
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