Gene Afer_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0425 
Symbol 
ID8322484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp425594 
End bp426220 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID644951577 
Productribosomal protein S4 
Protein accessionYP_003109066 
Protein GI256371242 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCT ACACCGGACC GGTGTGCCGG CTGTGCCGGC GTGAGCGGAC GAAGTTGTTC 
CTCAAGGGGC CGAAGTGCAT GAGCGCGAAG TGCCCCATTA CCCAAGGCCG GGTTCCTCCA
GGCCAGCATG GTCGGGATCG GCAGCGTCAA CCGTCCGAGT ACGCGATCCA GCTGCGCGAG
AAGCAGCGCG CGCGCCGAAC CTATGGCGTC ATGGGCAAGC AGTTCCAGCG CTTCTATCGT
GACGCGGCGC GGCGGTCGGG GATCACAGGC GAGAACTTGC TCGCCTTGCT CGAGCTTCGG
CTCGACAATG TGGTCTTCCG TGCCCTGTGG GGCTCCTCAC GGGCGCAGGC GCGTCAGCTC
GTCCGCCATG GCCACGTCCT CGTCGACGGT CAGCGGGTGG ATATCCCGAG CTATCGCCTC
CGGCCGGGGC AGGTCGTGAC GCTGAATCCC AAGGCGCGTG ACCTCGACAT CATTGCGTTC
AACCGAGAGC ACCTGACCCG TGAGGTCCCG GCGTGGCTCG AGGTCACCGA CGGGGGGTCT
GGAGTACGCG TGCTCAGCGT GCCGCTGCGC GACCAGATCG ACACCGAGGT CCGCGAGCAG
CTCATCGTCG AGCTCTTCTC CAAGTAG
 
Protein sequence
MARYTGPVCR LCRRERTKLF LKGPKCMSAK CPITQGRVPP GQHGRDRQRQ PSEYAIQLRE 
KQRARRTYGV MGKQFQRFYR DAARRSGITG ENLLALLELR LDNVVFRALW GSSRAQARQL
VRHGHVLVDG QRVDIPSYRL RPGQVVTLNP KARDLDIIAF NREHLTREVP AWLEVTDGGS
GVRVLSVPLR DQIDTEVREQ LIVELFSK