Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0425 |
Symbol | |
ID | 8322484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 425594 |
End bp | 426220 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644951577 |
Product | ribosomal protein S4 |
Protein accession | YP_003109066 |
Protein GI | 256371242 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGCT ACACCGGACC GGTGTGCCGG CTGTGCCGGC GTGAGCGGAC GAAGTTGTTC CTCAAGGGGC CGAAGTGCAT GAGCGCGAAG TGCCCCATTA CCCAAGGCCG GGTTCCTCCA GGCCAGCATG GTCGGGATCG GCAGCGTCAA CCGTCCGAGT ACGCGATCCA GCTGCGCGAG AAGCAGCGCG CGCGCCGAAC CTATGGCGTC ATGGGCAAGC AGTTCCAGCG CTTCTATCGT GACGCGGCGC GGCGGTCGGG GATCACAGGC GAGAACTTGC TCGCCTTGCT CGAGCTTCGG CTCGACAATG TGGTCTTCCG TGCCCTGTGG GGCTCCTCAC GGGCGCAGGC GCGTCAGCTC GTCCGCCATG GCCACGTCCT CGTCGACGGT CAGCGGGTGG ATATCCCGAG CTATCGCCTC CGGCCGGGGC AGGTCGTGAC GCTGAATCCC AAGGCGCGTG ACCTCGACAT CATTGCGTTC AACCGAGAGC ACCTGACCCG TGAGGTCCCG GCGTGGCTCG AGGTCACCGA CGGGGGGTCT GGAGTACGCG TGCTCAGCGT GCCGCTGCGC GACCAGATCG ACACCGAGGT CCGCGAGCAG CTCATCGTCG AGCTCTTCTC CAAGTAG
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Protein sequence | MARYTGPVCR LCRRERTKLF LKGPKCMSAK CPITQGRVPP GQHGRDRQRQ PSEYAIQLRE KQRARRTYGV MGKQFQRFYR DAARRSGITG ENLLALLELR LDNVVFRALW GSSRAQARQL VRHGHVLVDG QRVDIPSYRL RPGQVVTLNP KARDLDIIAF NREHLTREVP AWLEVTDGGS GVRVLSVPLR DQIDTEVREQ LIVELFSK
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