| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0418 |
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| Symbol | |
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| ID | 8322477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 421417 |
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| End bp | 422712 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644951570 |
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| Product | preprotein translocase, SecY subunit |
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| Protein accession | YP_003109059 |
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| Protein GI | 256371235 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGAGA ATTTCCTGAA CATCGTCCGG GTGAGGGACC TGCGCAACAA GGTCCTGTTC
ACGTTGGCGA TGATCGGCCT GTACCAGTTG GGTTCGAACA TCCCGGTGCC CGGGATCAGC
TACCACGCGA TCCAACAGGT CTTCTCGGAG GCCTCGGGCC AGGGTGTCCT CGGCTTCCTC
GACCTCTTCT CTGGCGGTGC GCTGTCGCGC GCGGCACTGT TCGGGTTGGG TGTGATGCCC
TACATCACCT CGTCGATCAT CATCCAGCTG CTCACCGGCG TCATTCCGAA GCTCTATCAG
TGGCGGGACG AGGGATCGTC TGGCGAGCGC AAGATCACCC AGACGACGCG CTATCTCACC
ATCGGGCTCG CGCTCGTACA GGCCACTGGC CTCGTGTTCG TGTTCCACTC GGGGCTCGGC
CTGTTCCTTG CGAACGGTCA GAGCGTGGAC CTGATCCCGC AGTTCACGGT GTTGCGGGTG
CTGTTCATCA TTCTGACCCT GACCGCCGGT ACGGCGCTCG TGATGTGGAT GGGCGAGCTG
ATCACCGAGC GCGGGGTCGG CCAAGGGATG AGCATCCTCA TCTTCGCCAA CGTCGTGAGC
GTGATCCCGA CCGCGGGGCG CCTGATCTAT GACCAGGCGG GCGCGCTCAA GCTCATCGTG
ATCGTGGTCG TGGTGGTCGC GCTCCTCGTT GCGATCGTCT TCGTGGAGCT CGGGCAGCGG
CGTATCCCCG TCGTGTTCGC GAGGCGCGTC GTCGGGCGTC GCATGTACGA GGGCGGGCGG
ACGTACATCC CGCTCAAGGT GAACCAAGCT GGGGTGGTGC CGATCATCTT CGCCGCCTCC
ATCTTGTACT TCCCGGTGCT GCTCTCGAAC ATCGTGCGCT GGAAGCCGCT CGTCACCTTC
GTCAACGATC ACCTGCTCAA CGCCACGAGT GGCTTCTACA TCGTGACCTA CGGGCTCTTG
ATCTTGGTCT TCACGTTCTT CTACGTGACG GTGTCGTTCG ACCCGTACCA GCAAGCCGAC
ATCATCCGAC AGCAAAACGG CTACATCCCG GGCGTGCGGC CGGGCGAGGA GACCAGGCGG
TACCTGTCTC GGATCTTGAA CCGCATCACC CTCCCGGGCG CCGTGTTCCT CGCTGCCGTC
GCCGTGATCC CATCGATTCT GCTCGCTGCG TGGCACGTGA CGTCGTTCCC GTACGCGGGT
ACGACCATCC TGATCGCCGT CGGTGTCGGT CTCGAGACCG TGAAGCAGGT GAACTCACAA
CTCACCATGC GCAACTACGA GGGATTCTTG CGCTAG
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| Protein sequence | MIENFLNIVR VRDLRNKVLF TLAMIGLYQL GSNIPVPGIS YHAIQQVFSE ASGQGVLGFL
DLFSGGALSR AALFGLGVMP YITSSIIIQL LTGVIPKLYQ WRDEGSSGER KITQTTRYLT
IGLALVQATG LVFVFHSGLG LFLANGQSVD LIPQFTVLRV LFIILTLTAG TALVMWMGEL
ITERGVGQGM SILIFANVVS VIPTAGRLIY DQAGALKLIV IVVVVVALLV AIVFVELGQR
RIPVVFARRV VGRRMYEGGR TYIPLKVNQA GVVPIIFAAS ILYFPVLLSN IVRWKPLVTF
VNDHLLNATS GFYIVTYGLL ILVFTFFYVT VSFDPYQQAD IIRQQNGYIP GVRPGEETRR
YLSRILNRIT LPGAVFLAAV AVIPSILLAA WHVTSFPYAG TTILIAVGVG LETVKQVNSQ
LTMRNYEGFL R
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