Gene Afer_0417 details

Gene Information

• Locus tag: Afer_0417
• ID: 8322476
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 420894
• End bp: 421394
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644951569
• Product: ribosomal protein L15
• Protein accession: YP_003109058
• Protein GI: 256371234
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTACC TCCATGATCT CAAGCCCGCC GAGGGTTCGC ACCATCGCAA GCGGCGCGTC 
GGTCGTGGCA TCGCGGGCAA GGGCGGCAAG ACCGCCGGCC GCGGCACGAA GGGTCAAGGC 
GCTCGCGATA CGGTTCCCGT CGGCTTCGAG GGCGGCCAGC TGCCCTTGAC GCAGCGCACG 
CCGAAGCTGC GGGGCTTTCG CAACCCGTTC CGGGTTGCCT ATACGGTCGT CAACCTCGAC 
CAGCTTGCTC GGCTTGGCGA GGAGGGCATG GCCGAGGTCG ATCCGACGTC GCTGGTCGCG 
CGCGGGGTGG TTCGTCGCGG CGCGCTCGTG AAGGTCTGTG CTCGCGGAGA GCTGCATGCA 
CCCCTCGTCG TGCGCGCCCA TGGGTTCTCG CAGGCGGCGA AGGCGGCGAT CGAGGCTGCT 
GGCGGCCGTG TCGAGACGGT CGCGGTCCCC TTCAAGGGTC CTCGGCCTCG CGCTGCCGGC 
AGCGCGTTGT CCAACCGCTG A 

 

Protein sequence

MIYLHDLKPA EGSHHRKRRV GRGIAGKGGK TAGRGTKGQG ARDTVPVGFE GGQLPLTQRT 
PKLRGFRNPF RVAYTVVNLD QLARLGEEGM AEVDPTSLVA RGVVRRGALV KVCARGELHA 
PLVVRAHGFS QAAKAAIEAA GGRVETVAVP FKGPRPRAAG SALSNR