Gene Afer_0415 details

Gene Information

• Locus tag: Afer_0415
• ID: 8322474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 420162
• End bp: 420713
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644951567
• Product: ribosomal protein S5
• Protein accession: YP_003109056
• Protein GI: 256371232
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGACAA ACGAGTTCGA AGACCGCACC ATCAAGGTCA ATCGGGTATC GAAGGTCGTC 
AAGGGCGGTC GTCGATTCTC CTTCACGGCG CTCATGGTCG TCGGTGATCA CGCGGGCCAG 
GTGGGGCTCG GCTACGGCAA GGCCAAGGAG GCGAGCCTCG CCGTGCAGAA GGGGGTCGAC 
GAGGCCAAGC GCAAGCTGGT GCGCGTGCCG CTCGTCCACG GGACCATCCC GCACGCGGTG 
GTCGGCGTCG CGGGAGCGGG GAGGGTCTTG CTCAAGCCTG CCGCACCCGG TACGGGTGTG 
ATCGCCGGCG GTGCTGCGCG CGCGATCTTG GAGCTTGCCG GCGTCACCGA CGTGCTGGCG 
AAGTCCCTCG GTTCCTCGAA CGGCATTAAC GTGGCCTATG CCACACTCGC AGGACTCGAG 
GCGTTGCTCT CGCCGCAGCG CATCGCCGAG GCTCGTGGTC GTTACGTGGA TCAAGTCGCT 
CCTCGATGGC TCATCGAGGA GAGTCCGGCG CGTGTCGATG GAGAAGTCGT GGAGGTTGGG 
GCCGATGGCT AG 

 

Protein sequence

MATNEFEDRT IKVNRVSKVV KGGRRFSFTA LMVVGDHAGQ VGLGYGKAKE ASLAVQKGVD 
EAKRKLVRVP LVHGTIPHAV VGVAGAGRVL LKPAAPGTGV IAGGAARAIL ELAGVTDVLA 
KSLGSSNGIN VAYATLAGLE ALLSPQRIAE ARGRYVDQVA PRWLIEESPA RVDGEVVEVG 
ADG