Gene Afer_0413 details

Gene Information

• Locus tag: Afer_0413
• ID: 8322472
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 419252
• End bp: 419791
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644951565
• Product: ribosomal protein L6
• Protein accession: YP_003109054
• Protein GI: 256371230
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCGGA TTGGGAGGCA ACCCATCGCG GTGCCTGGCG GCGTCGAGGT GGCGGTGGAT 
GGCCAGCACG TGTCGGTGCG CGGGCCGAGG GGTTCGCTCG CTCGCGACCT GCCGCCGGAG 
GTCACGGTGA GCGTGGTCGA CAGCGTGGTG CACGTCGAAC GGAGCGATGA CTCGAGGCGC 
GCTCGGGCCA TGCACGGGCT CTCACGGACG CTGGTCGCGA ACATGGTGCG CGGTGTGGCC 
GAGGGCTACG AGAAGACACT GGAGATCATC GGAACGGGCT ATCGCGCCCA GGCGCGTGGC 
ACCGGCGAAC TCGAGCTCGC GCTCGGCTTC TCGCACCCAG TCGTGGTCGA GGCGCCCGAT 
GGCATCGCGT TTGCGACGCC GACGCCCCAG CGCGTCGTGG TCTCGGGCAT CGACAAGGAA 
CTCGTTGGAC AGGTGGCGGC CAATATCCGC CGCATCCGCA AGCCAGAGCC CTACAAGGGC 
AAGGGTGTGC GCTACCTCGG CGAGCGGGTT GTCCGTAAGG CCGGCAAGGC CGGGAAGTAG 

 

Protein sequence

MSRIGRQPIA VPGGVEVAVD GQHVSVRGPR GSLARDLPPE VTVSVVDSVV HVERSDDSRR 
ARAMHGLSRT LVANMVRGVA EGYEKTLEII GTGYRAQARG TGELELALGF SHPVVVEAPD 
GIAFATPTPQ RVVVSGIDKE LVGQVAANIR RIRKPEPYKG KGVRYLGERV VRKAGKAGK