Gene Afer_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0410 
Symbol 
ID8322469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp418066 
End bp418635 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content66% 
IMG OID644951562 
Productribosomal protein L5 
Protein accessionYP_003109051 
Protein GI256371227 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCAGA CCGATACGGC CCCCAGGCCG CGGCTACGGG TGCGCTTCGA CGAGGAAGTG 
CGCCCCGCAT TGTTCCGAGA TCTCGGTCTC GAGAACGTCA ACCAGGTGCC CAGGCTCGCC
AAGATCGTGG TCAACATGGG CGTAGGGCGG GCCAGCGCAC AGCCGAGTCT GCTCGAGGGA
GCGGTCCGCG ACCTGGAGAC GATCACGGGC CAGCGCCCGT CGATCCGCAG GGCTCGCAAG
TCCATCGCGG GCTTCAAGCT GCGCGAGGGC ATGGCGATCG GGGCGACGGT GACCCTGCGC
GGCGACCGCA TGTGGGAGTT CTACGATCGG CTGGTCGCGG TCGCGATTCC CCGCATCCGT
GACTTCCGCG GGCTCAATCC CCGGTCGTTC GACGGGCACG GCAACTACAC CTTTGGCGTC
ACGGAGCAGC TGATCTTTCC GGAGATCGAC TACGACTCGG TCGACACCAC GCGTGGTATG
GACATCACCA TCGTCACGAC CGCAACGACG GACGCGCATG GGCGTGCTCT GCTCGAAGCG
CTCGGTTTTC CGTTTCGGAG GGAAGGGTAA
 
Protein sequence
MVQTDTAPRP RLRVRFDEEV RPALFRDLGL ENVNQVPRLA KIVVNMGVGR ASAQPSLLEG 
AVRDLETITG QRPSIRRARK SIAGFKLREG MAIGATVTLR GDRMWEFYDR LVAVAIPRIR
DFRGLNPRSF DGHGNYTFGV TEQLIFPEID YDSVDTTRGM DITIVTTATT DAHGRALLEA
LGFPFRREG