Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0410 |
Symbol | |
ID | 8322469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 418066 |
End bp | 418635 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644951562 |
Product | ribosomal protein L5 |
Protein accession | YP_003109051 |
Protein GI | 256371227 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTCAGA CCGATACGGC CCCCAGGCCG CGGCTACGGG TGCGCTTCGA CGAGGAAGTG CGCCCCGCAT TGTTCCGAGA TCTCGGTCTC GAGAACGTCA ACCAGGTGCC CAGGCTCGCC AAGATCGTGG TCAACATGGG CGTAGGGCGG GCCAGCGCAC AGCCGAGTCT GCTCGAGGGA GCGGTCCGCG ACCTGGAGAC GATCACGGGC CAGCGCCCGT CGATCCGCAG GGCTCGCAAG TCCATCGCGG GCTTCAAGCT GCGCGAGGGC ATGGCGATCG GGGCGACGGT GACCCTGCGC GGCGACCGCA TGTGGGAGTT CTACGATCGG CTGGTCGCGG TCGCGATTCC CCGCATCCGT GACTTCCGCG GGCTCAATCC CCGGTCGTTC GACGGGCACG GCAACTACAC CTTTGGCGTC ACGGAGCAGC TGATCTTTCC GGAGATCGAC TACGACTCGG TCGACACCAC GCGTGGTATG GACATCACCA TCGTCACGAC CGCAACGACG GACGCGCATG GGCGTGCTCT GCTCGAAGCG CTCGGTTTTC CGTTTCGGAG GGAAGGGTAA
|
Protein sequence | MVQTDTAPRP RLRVRFDEEV RPALFRDLGL ENVNQVPRLA KIVVNMGVGR ASAQPSLLEG AVRDLETITG QRPSIRRARK SIAGFKLREG MAIGATVTLR GDRMWEFYDR LVAVAIPRIR DFRGLNPRSF DGHGNYTFGV TEQLIFPEID YDSVDTTRGM DITIVTTATT DAHGRALLEA LGFPFRREG
|
| |