Gene Afer_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0386 
Symbol 
ID8322445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp396466 
End bp397197 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID644951538 
ProductNusG antitermination factor 
Protein accessionYP_003109027 
Protein GI256371203 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCCCG AGGAGATGGA ATCGACGCAC CAGCCCGCGC TGGTCCACGA TGACGACCGA 
GCTGCGGAGA GCCGCGAGGT CGCATCCGCT GACGCGCCAG CTGTGCAGAG CCGCGACGAT
GGTGAGGCGA CGGACCCCAA GGGCAGCGGT GATGACGACG TGAGCGCTGC CGAGGATTCT
CCGTACGATC GTCCGGGCGA GTGGTACGTC GTCCACTGCT ACTCCGGCTA CGAGAACCGG
GTTCGCCAGA ACCTCGCGAC GAGGATCCGC TCGCTCGGCC TCGAGGATCG CATCTTCGAG
GTGGAGATCC CGATGGAGGA CGTCACCGAG CTCAAGAACG GGCGACGAGT GAAGGTGCAG
CGCAAGGTCT TTCCTGGGTA TGTGCTCGTA CGGGCCGAGA TGGACGACGA GGTCTGGTCC
GCCATACGCA ACACCCCCGG CATCACCTCG TTCGTCGGAT CGGGATCGAA GCCGGTGCCG
CTGAGCCGCA AGGAAGTCGA GGCGATGTTC TCGTTCGCCA CGCCGGAGGA GCTGCGCCCG
CAGCCACAAC GGCGCTCGAC GCAAGAGTTC GAGATCGGCG AAACGGTGCG CGTCAAGGAG
GGCCCGCTCG CGGACTTCGT CGGCGAGGTG GCCGAGGTGA ACGCCGATCA GCTCAAGCTG
AAGGTGCTCT TCAACATCTT CGGTCGAGAG ACGCCGGTGG AACTCGACTT CACGCAGGTG
TCGAAGGCCT AG
 
Protein sequence
MSPEEMESTH QPALVHDDDR AAESREVASA DAPAVQSRDD GEATDPKGSG DDDVSAAEDS 
PYDRPGEWYV VHCYSGYENR VRQNLATRIR SLGLEDRIFE VEIPMEDVTE LKNGRRVKVQ
RKVFPGYVLV RAEMDDEVWS AIRNTPGITS FVGSGSKPVP LSRKEVEAMF SFATPEELRP
QPQRRSTQEF EIGETVRVKE GPLADFVGEV AEVNADQLKL KVLFNIFGRE TPVELDFTQV
SKA