| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0374 |
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| Symbol | |
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| ID | 8322429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 382893 |
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| End bp | 384770 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644951522 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_003109015 |
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| Protein GI | 256371191 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCA TCACCGCTGT CATCGGGTTT CCGCTCCTTG GCTTCCTCGT GCTCCTTGCG
TTCGGCAAGC GCATCGGCGA GCCGCGCGCT GGTTGGGTCG GTACCATCGC GACCACGCTG
TCGTTCGTCG CCGCGCTCGC GCTCTGGGGC GTCGTGCTGG CACGACCGGC CGACGAGCGG
GTCGCGGTCG TCCGCCTGTT CACGTGGTTT CGCGCTGGCC CCTTGGTGGC GCACATCTCC
TTCCGCGTCG ATGAACTCAC CGTGTTCATG GTGCTCTTCG TGACCGGTGT CTCGTCACTG
ATCCACCTCT ACTCGATCGG CTACATGCAT CGAGACCCCA GGTTCCACCA GTTCTTCGTC
TATCTGAACC TGTTCGTCTT CTCCATGACC GTGCTGGTGA GCTCGAACAA CTTGCCACTG
ACCTTCCTCG GGTGGGAGGG CGTCGGCGCG TGCTCCTACT GGTTGATCAG CTTCTGGTTC
GAGCGCCCCT CGGCTGCGAG CGCCGGCAAG AAGGCGTTCA TCGTCAATCG GATCGGCGAT
GCAGGCTTCA TCCTCGGCAC GGCGCTCATC GTGGACCATC TGCACTCGGT GAGCTACTCG
GTGATCCTGC CCGAAGCCCA TCGGCTCTCG AGCGGCACGC TCGAGGCGGT CGCGCTGCTG
TTCTTCCTGG CAGCGGTCGG CAAGTCTGCC CAGCTGCCGC TGTTCGTGTG GCTACTGGAC
GCCATGGAGG GCCCGACACC GGTGTCGGCA CTGATCCATG CGGCGACCAT GGTGACCGCA
GGTGTCTTCT TGATGGCGCG TCTGTCGGCG TTCGTGACTC CCGCCCATGA CGCCGCCACG
GTCATCGCGT GGATCGGCGC GATCACGGCC TTCGTCGCGG CGATGGCCGC GACCTCGCAG
CACGACATCA AGAAGATCGT CGCGTACTCG ACCGTCTCGC AGCTCGGCTA CATGATGCTC
GGCATCGGGA CCGGTGCCTA CGTCGCGGCG CTGTTTCTGA TGGTGACGCA CGCGTTCTAC
AAGGCGTTGA TCTTCCTTGC CTCCGGTTCG GTCATCCACT CGCTCGATGG CGAGCAGGAC
GTGCGTCGTA TGGGTGCGCT CCGTCGCTTC ATGCCGATCA CGGCCGTCAC CATGATCCTC
GCGTGGCTCT CGATCGCGGG GGTACCTCCG TTCTCCGGCT TCTTCTCGAA GGGGTCGGTC
CTCGAGGCAG CCTTTGCCCA CCAGCCGGTG CTGTGGGCGA TCGGTGTCGT GACCGCCGTG
CTCACCGCGT ACTACATGGG TCGACTCGTC TACGTCGTGT TCTACAACGA GCCGCGCTAC
CAGGAGGTCC TCGGCGAGCG GAGCCCACAC GAGTCGCCCC GAGTCATGAC GGTGCCACTG
GTGGTCCTGG CGGTGGCCGC AGTGCTCGGA GGGCTCATCA ACCTGCCCTT CGGGAGCTTG
GACTTCCTCG ATCGATTCCT GGCGCCGGTC TTCGGCCCTT CGCTCGTTGC CGTGCATCTG
TCGGGCGTCG CTCGGGCGGC GCTGCTTGCG ACCGATGCGG TCGCCGGCCT CCTCGGCGTC
GGGTTGGCGT GGCAGCTCTG GGGCCATCGG TGGCGTCGGC CCGAGCTCGA GCCGATGGTG
CTCCAGCGCG GTTGGTACGT GGATGCAACC TACGACCGCG TCATCGCGCG TCCGATGACC
GAGCTCGCGC TCGAGGCGGA CGAGGTCGTC GATCCGAAGG TGATCGATGG CGCGGTGATG
AGCGTCGCGT GGGCAGCTCG GCGAATCGGT GGCCTGGGCC GACGGGTACA GACCGGGCTC
GTGCGCAGCT ACCTGTTGCT GATGGTGGCC GGGATCGTCG TGGTGATGGG CTACGTGCTC
GCAGTGGCGA CACGTTAG
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| Protein sequence | MDLITAVIGF PLLGFLVLLA FGKRIGEPRA GWVGTIATTL SFVAALALWG VVLARPADER
VAVVRLFTWF RAGPLVAHIS FRVDELTVFM VLFVTGVSSL IHLYSIGYMH RDPRFHQFFV
YLNLFVFSMT VLVSSNNLPL TFLGWEGVGA CSYWLISFWF ERPSAASAGK KAFIVNRIGD
AGFILGTALI VDHLHSVSYS VILPEAHRLS SGTLEAVALL FFLAAVGKSA QLPLFVWLLD
AMEGPTPVSA LIHAATMVTA GVFLMARLSA FVTPAHDAAT VIAWIGAITA FVAAMAATSQ
HDIKKIVAYS TVSQLGYMML GIGTGAYVAA LFLMVTHAFY KALIFLASGS VIHSLDGEQD
VRRMGALRRF MPITAVTMIL AWLSIAGVPP FSGFFSKGSV LEAAFAHQPV LWAIGVVTAV
LTAYYMGRLV YVVFYNEPRY QEVLGERSPH ESPRVMTVPL VVLAVAAVLG GLINLPFGSL
DFLDRFLAPV FGPSLVAVHL SGVARAALLA TDAVAGLLGV GLAWQLWGHR WRRPELEPMV
LQRGWYVDAT YDRVIARPMT ELALEADEVV DPKVIDGAVM SVAWAARRIG GLGRRVQTGL
VRSYLLLMVA GIVVVMGYVL AVATR
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