Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0358 |
Symbol | |
ID | 8322413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 366120 |
End bp | 367337 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644951506 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003108999 |
Protein GI | 256371175 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCACATCG CCATGATCGC CTATCACGCC TCCCCGTTTG CCACACCGGG AGCGGGAGCG AACGGCGGCA TGAGCGTGTA CGTTCGCAAC CTCGCGACCC AGCTCGCTCG CTCCGGCCAC GAGGTGGACA TCTTCACCGG CGCACACGAC GTGCCCGGTC GGCATCGCAT CGAACCAGGG CTCTGGCTGC ATGCACTCAG CGACGATGAC CGCGAGCGCG ACCTCACCCG CCGTGTCGAC CACTTCGCCG AACGTGTGCT CGAGGCGCTC GACCGCAGTA CGAGCATCGA CGCGGTGCAC GCGAACTATT GGCTCTCAGC CGTCGTGGCC CACAGCGCCA AGCACGAGCT CGGGCTCCCG CTTGCCGTCA CGTTCCACAC CCTCGAGCGT GCCAAGCTCC GTCTCGGCCA ACCTCCGAGT CACCTCACCG AGGCCCGCGT CTATCAAGAG CAACGCGTGC TCGGCTGCGC CGATCTCATC GTGAGTTCGA GCCGGGCCGA GGCGACGTGG CTGCGAACGC TCTATGGTCC GCCTCGCGGC CAGCTCGTCG TCGTGGAACC GGGGATCGAT CCTGCCGTCT TCTCCCCGAC CCTCTCACGA GGGCCTGCGA GGCGTGCCAT CGGGGTCCCC CCCGATGCAT CGGTCATCTT GTGGGTCGGG CGCATCCAGT CGCTCAAGGG CACAGCCCTT GCGGTCGCGT CGTGGCTCGA ACTCGACGAC CCGCGGAGCC ACCTCGTCGT CGTTGGCGGC CCATCCGGGG ACGACGGAGA CCGCGAGTTC GCGGAGGTTC GTAGGCTCGC CGAGGACGCG GGTGCGTCTG ACCGGCTTCA CCTCGTCGGA CCACGCCCCC AGATCGAGCT GGGCACCTAC TACCGCGCCG CCAACCTCAC GCTCGTCCCT TCCGAGAGCG AGACGTTCGG GCTCGTCGCG CTCGAGTCGC TTGCGTGCGC GACGCCGGTC GTCGCGACGC GGACCGGCGG ACTTGCCGAG ATCGTCGATG ACGGTCGTAC CGGAGCCTTG GTCGACGAAC GTACGCCTCG CGCCTTCGCC GATCGCATGG CCCTCGTGCT CCGTGACCCG GTCGTGGCGA GGCGCATGGG CGAGCGTGGC GCGCGACGCG CGCGCGGACG CACCTGGGCC CACACCGCGA ACGACTTCCT CACCTCGCTC GCCGATCTGT CGGCCACACC TCTCGACGCC TGCGCGAGCT GCGCCTAA
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Protein sequence | MHIAMIAYHA SPFATPGAGA NGGMSVYVRN LATQLARSGH EVDIFTGAHD VPGRHRIEPG LWLHALSDDD RERDLTRRVD HFAERVLEAL DRSTSIDAVH ANYWLSAVVA HSAKHELGLP LAVTFHTLER AKLRLGQPPS HLTEARVYQE QRVLGCADLI VSSSRAEATW LRTLYGPPRG QLVVVEPGID PAVFSPTLSR GPARRAIGVP PDASVILWVG RIQSLKGTAL AVASWLELDD PRSHLVVVGG PSGDDGDREF AEVRRLAEDA GASDRLHLVG PRPQIELGTY YRAANLTLVP SESETFGLVA LESLACATPV VATRTGGLAE IVDDGRTGAL VDERTPRAFA DRMALVLRDP VVARRMGERG ARRARGRTWA HTANDFLTSL ADLSATPLDA CASCA
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