| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0352 |
|---|
| Symbol | |
|---|
| ID | 8322407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 360734 |
|---|
| End bp | 362161 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644951500 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_003108993 |
|---|
| Protein GI | 256371169 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC TCACCGCCGT GGGTCGGCTC GACCAGGCCG AGCGGACGGC GCTGCGTGAG
ATCTTGCGGT TCTGGGGATT CCTGGCCGAC CTCGCGTTCT CGGACCTGTT CATCGCCCTG
CCCGACGGGG ACGACTTCGT CGTCGTGGCC CAGGTCCGTC CGGCGACCAC CCAGACCATT
CACCCGGGCG ACCTGATCGA GACTCGCCTC GGTCCCGACG AGGCGCGACA CCTCGCCGAG
GCGATGGAGG CGAGGGTCAT GGCGACCGTG GATCGCTCCG ACGGGACTCG CCTCATCCGC
TCCGCCGCGT TGCCGCTCGC CATCGAGGGG CATCTGCCCT ACGGGGTGCT GGTGCGAGAG
CGCCTCGTCG AGCACTATCG CACCACCGGC GAACTCGAGG CAACCTACAA GGCGCTCTAC
GAGCGCTTCA GCCGGATGAT GGTCCAGGGC CGTTTTCCGT ATCCCCAGAG CGACGTCGAA
GAGGCGCCGC GCGTCGGCGA CGGTGTGCTC GTGCTCGATC GCGCTGGCCG CATCACGTTC
TTGTCGCCGA ACGCGACGAG TGCGCTCCAT CGCCTCGGCG CCACGGAGGT GACCTCGGGG
GCGGCGCTCG CCGACGTCGG CATCGACGTG CTCGCACCGG CCCGGGCTGC GGCGCTCGGC
GCGCCCGTGC TCGAGGAGGT GGAGCATGCG GGCGGTGCCA CGGTGACCTT CTACTGCCTG
CCGCTTTACG ACGCGGGCGA GCTCACCGGG CACCTCGTGC TCGTGCGCGA CGTCACCGAC
ATTCGCCAGC GCGAGCGGGT CATCGCCTCG AAGGACGCCA CGATCCGCGA GGTGCACCAC
CGGGTCAAGA ACAACCTCCA GACCATCTCG TCGCTGCTGC GGCTCCAGGC GAGGCGCCTC
GCCGACCAGG AGGCGGTCGC GGCGCTCGCC GAGGCGGAGC GACGCATCCG CTCGATCGCA
CTCGTCCACG AGTTCCTCTC GCGGGACGTG TCGGAACAGG TGGAGGTGGA TGAGGTGCTG
GCGGCCATCG GTCGCTTGGC CGAGGAGTCC AAGCTGCCAG GACGCACGCT CGAGCTGGCG
ATCGAGGGCT CGGCGGGCAA GGTCGAGGCG ACCTGCGTGA CGCCGCTTGC CATCGCCCTC
GCAGAGCTGA TCCAGAACTC CCTCGAGCAC GGCTACGGCA CTGAGAGAAC GCACCTGCGC
GTCGAGGTGG CTCTCGAGCG ACACGGTCCC GAGCTCTGGG TGGTCGTGGC GGACGACGGC
GTCGGGTACC CGAGCGACCT GGATGCGCGG AGCGCTCGCT CCCTGGGGCT TGCGATCGTT
CGAGATCTCG TGGCCTCGCA GCTCGGCGGC ACTATTCAGC TTGCGCGAAC GCCCGGCGGC
GGCGCGCTCA CGCGGCTTCG AGTCCCCGTC GAGCGTCACG AGCGCTGA
|
|---|
| Protein sequence | MTELTAVGRL DQAERTALRE ILRFWGFLAD LAFSDLFIAL PDGDDFVVVA QVRPATTQTI
HPGDLIETRL GPDEARHLAE AMEARVMATV DRSDGTRLIR SAALPLAIEG HLPYGVLVRE
RLVEHYRTTG ELEATYKALY ERFSRMMVQG RFPYPQSDVE EAPRVGDGVL VLDRAGRITF
LSPNATSALH RLGATEVTSG AALADVGIDV LAPARAAALG APVLEEVEHA GGATVTFYCL
PLYDAGELTG HLVLVRDVTD IRQRERVIAS KDATIREVHH RVKNNLQTIS SLLRLQARRL
ADQEAVAALA EAERRIRSIA LVHEFLSRDV SEQVEVDEVL AAIGRLAEES KLPGRTLELA
IEGSAGKVEA TCVTPLAIAL AELIQNSLEH GYGTERTHLR VEVALERHGP ELWVVVADDG
VGYPSDLDAR SARSLGLAIV RDLVASQLGG TIQLARTPGG GALTRLRVPV ERHER
|
|---|
| |