Gene Afer_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0351 
Symbol 
ID8322406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp359862 
End bp360728 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content70% 
IMG OID644951499 
ProductPHP domain protein 
Protein accessionYP_003108992 
Protein GI256371168 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID[TIGR01856] histidinol phosphate phosphatase HisJ family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGACT ACCACCTGCA CCTGTGGCCC CATGGTGAGC GCGATCGCGA CGTCGTCATC 
GAGGAGCTTG CTGCGTTCTG TGAACGCGCA CAGGGTCGCG GTGTCGACGA GATCGCGATC
ACGGAGCACT TCTACCGATT TCGCCAGGCT GGCTCGGCGG TCGGTGGCTT CTTCCGGCGC
TACCCGGATT CGCCGGTGCG CGCCGAGATG GAGCGCTACT GGGAGGAGAA CTCCCGGGCG
GATCTCGACG CCTACGTCGA GACGGTGCTT GCGGCCAAGC GCGAGGGCTT GCCGGTCGTC
CTTGGTCTGG AGGTCGACTA CTACGAGGGC GCCATGGACC GTGTCGCGGC GCTCCTTGCC
GGCTACCCCT TCGACGTGCT GCTGGGGTCG GTGCACTGGG TCGGTGCCTG GGCCTTCGAC
CACCTCTCCG ACCCCATCAT GATGGCCGAG TGGGAGCGCG TCGGCGTCGA GCCCGCCTGG
GCGGCCTACA CCCGAAGCCT CGAGGAGCTG GCTGCGAGCG GCGCGGTCGA CGTGCTCGCT
CACCCGGACC TCATCAAGGT CGCCGGTCAC CGACCGGAGG TGCCCGACGA GTACGAGGCG
CGTATGGCCG AGGCGGCGCG TGCGTCCGGC ATGGTTGCCG AGGTGTCCTC GGCCGGTGCG
CGCAAGCCCG TCGGCGAGAT CTACCCGTCG CCGTCGCTCC TCGCTCGGTT CGTGGCGGCG
GGCGTGCCAT TGACGACGGC GTCGGATGCC CATGGGCTCG GAGACGTGGC CGATCGATCG
AGCCAGCTGC GAGCCACGCT CGAGGCGGCA GGCGTGAGCG AGCTCGCAGC CTTCCGGGCG
CGGCGGCGTC AGTCGGCACT CCTCTAG
 
Protein sequence
MIDYHLHLWP HGERDRDVVI EELAAFCERA QGRGVDEIAI TEHFYRFRQA GSAVGGFFRR 
YPDSPVRAEM ERYWEENSRA DLDAYVETVL AAKREGLPVV LGLEVDYYEG AMDRVAALLA
GYPFDVLLGS VHWVGAWAFD HLSDPIMMAE WERVGVEPAW AAYTRSLEEL AASGAVDVLA
HPDLIKVAGH RPEVPDEYEA RMAEAARASG MVAEVSSAGA RKPVGEIYPS PSLLARFVAA
GVPLTTASDA HGLGDVADRS SQLRATLEAA GVSELAAFRA RRRQSALL