Gene Afer_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0330 
Symbol 
ID8322385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp340976 
End bp341677 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content70% 
IMG OID644951478 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003108971 
Protein GI256371147 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCCG ACACACGGGC TCACCGACTC CCAGCCGAGC GTCGGCGAGC GCTCATCCTG 
GACGCGGCGC GAACGGTCTT TGCGCAGCGT GGGTTCGAGT CGGCGTCGAT GGACGAGGTA 
GCACGCCATG CGCGGGTGAC GAAGCCCGTC ATCTACCAGC ACTTTGCCTC GAAGCGCGCC 
CTCTTTCGTG AGGTCATCGA CGGTGCCGGG GCCGAGCTGG CGCGCGCGAT CGCCGAGGCG 
ACGCGCGGCG TCGAGAGCCC CCGCGTGCGG CTGTGGTCTG GCATCCGCGC GTTCTTCGCC 
TTCGTGCACG CGCACCGCGC GGCCTACCTC GTGCTCTTCG GGCCAGGTGT CTACCGCGAC 
GTCGAGTTTC AGTCGATCGT CGTTGGTATC GAGCTGGCGA TCGCCGATCT CGTTGCCGAG 
TCGATCACAG GAGCACCCAG CGAGTCCGAT CGGCTGCTGA CCGCACGGGC ACTCATCGGC 
CTCGCCAACG GCGCGGCCGC CGCCTACATC GACGACGTCG ACGACGACGA GCCGAATCGG 
CCGTTCGAGG CCTCACTGGC GGCGCGCTAC GCCGAGCGCA CCGCCGCTCT GGCGTGGGCG 
GGGTTGCGAC ACCTCGGTCG CAGCGATGTC GCCACCACCG AGTCGTCGGC ACCGCTCACG 
CTGGGAGCGG CAGGCCCCGA GCCAGGAGTC TCACCTCGAT AG
 
Protein sequence
MQADTRAHRL PAERRRALIL DAARTVFAQR GFESASMDEV ARHARVTKPV IYQHFASKRA 
LFREVIDGAG AELARAIAEA TRGVESPRVR LWSGIRAFFA FVHAHRAAYL VLFGPGVYRD 
VEFQSIVVGI ELAIADLVAE SITGAPSESD RLLTARALIG LANGAAAAYI DDVDDDEPNR 
PFEASLAARY AERTAALAWA GLRHLGRSDV ATTESSAPLT LGAAGPEPGV SPR