Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0330 |
Symbol | |
ID | 8322385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 340976 |
End bp | 341677 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644951478 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003108971 |
Protein GI | 256371147 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCCG ACACACGGGC TCACCGACTC CCAGCCGAGC GTCGGCGAGC GCTCATCCTG GACGCGGCGC GAACGGTCTT TGCGCAGCGT GGGTTCGAGT CGGCGTCGAT GGACGAGGTA GCACGCCATG CGCGGGTGAC GAAGCCCGTC ATCTACCAGC ACTTTGCCTC GAAGCGCGCC CTCTTTCGTG AGGTCATCGA CGGTGCCGGG GCCGAGCTGG CGCGCGCGAT CGCCGAGGCG ACGCGCGGCG TCGAGAGCCC CCGCGTGCGG CTGTGGTCTG GCATCCGCGC GTTCTTCGCC TTCGTGCACG CGCACCGCGC GGCCTACCTC GTGCTCTTCG GGCCAGGTGT CTACCGCGAC GTCGAGTTTC AGTCGATCGT CGTTGGTATC GAGCTGGCGA TCGCCGATCT CGTTGCCGAG TCGATCACAG GAGCACCCAG CGAGTCCGAT CGGCTGCTGA CCGCACGGGC ACTCATCGGC CTCGCCAACG GCGCGGCCGC CGCCTACATC GACGACGTCG ACGACGACGA GCCGAATCGG CCGTTCGAGG CCTCACTGGC GGCGCGCTAC GCCGAGCGCA CCGCCGCTCT GGCGTGGGCG GGGTTGCGAC ACCTCGGTCG CAGCGATGTC GCCACCACCG AGTCGTCGGC ACCGCTCACG CTGGGAGCGG CAGGCCCCGA GCCAGGAGTC TCACCTCGAT AG
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Protein sequence | MQADTRAHRL PAERRRALIL DAARTVFAQR GFESASMDEV ARHARVTKPV IYQHFASKRA LFREVIDGAG AELARAIAEA TRGVESPRVR LWSGIRAFFA FVHAHRAAYL VLFGPGVYRD VEFQSIVVGI ELAIADLVAE SITGAPSESD RLLTARALIG LANGAAAAYI DDVDDDEPNR PFEASLAARY AERTAALAWA GLRHLGRSDV ATTESSAPLT LGAAGPEPGV SPR
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