| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0323 |
|---|
| Symbol | |
|---|
| ID | 8322378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 335059 |
|---|
| End bp | 335928 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644951471 |
|---|
| Product | Methenyltetrahydrofolate cyclohydrolase |
|---|
| Protein accession | YP_003108964 |
|---|
| Protein GI | 256371140 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.044033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAGCCA AGCTGCTCGA TGGGGAGCGC GTCGCCGCCG AGGTGCGCGC CGAGGTGCGC
GATCGGGTCG AGCGCCTGCG TGCGGCGGGC GTGCGCGTGG GGCTCGGGGC GATCCTCGTC
GGGGACGATC CGGCGAGTGC GCGGTACGTC GAGATGAAGG CGCGCGACTG CGCGAGCGTG
GAGATCGCGT CTCGCGTGGT GCGCCTCGGC CCGGATGCCT CACAGGCGGA CGTCCTCGCG
GCGGTCGAGT CGTTGAACGC GGACCCGGAG GTGAGCGCGT TCATCGTCCA ACTCCCGCTC
CCTCGGCACC TCGACCCAGA TGCCGTGCTC TGGGCGATCG ACCCGGCCAA GGACGCCGAC
GGATTGCATC CGGTGAACCT GGGCGAGCTC GCGCTCGGAC GCCCGCGCGT CGTGGCGTGC
ACCCCGGCGG GCATCGTGGA GCTGCTCCAC CGTCACGGGA TCGTCCTCGA CGGTGCGCAT
CTCGTCGTGG TGGGCCGGGG CCTGACGATC GGGCGTCCGC TCTCGATCCT CGCGTCGCTG
CCCCGAGCGG GTCTCAACGC AGCCGTCACC GTCGTTCACT CGCGGGTGCG CGACCTCGCC
AGCATCGTTC GCAGTGCCGA CATCGTCGTG GCAGCCGCTG GCAGCCCCGG CCTCGTGACC
GGCGCCATGG TGCGCCCTGG CGCCGTGGTG GTCGGTGCCG GCACCAGCTT CGAAGGACGG
CGCCTGCTCT CGGACCTCGC CGACGACGTT GCGGACGTCG CTGCGTGGGT GACGCCACGC
ATCGGTGGGG TCGGACCGAT GACGAGGGCC ATGCTCCTCG TCAACACCGT CGAGGCGGCC
GAGCGGCGAG CCGGTCGGAG CGAGCCGTGA
|
|---|
| Protein sequence | MGAKLLDGER VAAEVRAEVR DRVERLRAAG VRVGLGAILV GDDPASARYV EMKARDCASV
EIASRVVRLG PDASQADVLA AVESLNADPE VSAFIVQLPL PRHLDPDAVL WAIDPAKDAD
GLHPVNLGEL ALGRPRVVAC TPAGIVELLH RHGIVLDGAH LVVVGRGLTI GRPLSILASL
PRAGLNAAVT VVHSRVRDLA SIVRSADIVV AAAGSPGLVT GAMVRPGAVV VGAGTSFEGR
RLLSDLADDV ADVAAWVTPR IGGVGPMTRA MLLVNTVEAA ERRAGRSEP
|
|---|
| |