Gene Afer_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0312 
Symbol 
ID8322367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp326198 
End bp327955 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content66% 
IMG OID644951460 
Productsuccinate dehydrogenase or fumarate reductase, flavoprotein subunit 
Protein accessionYP_003108953 
Protein GI256371129 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGTGA ACGTTCACCA TCACAGCTAC GACGTCGTCA TCGTGGGCGC AGGCGGAGCC 
GGCCTGCGCG CGGCGATCGA GACGGCCGGG ACCGTGCGCA CCGCGGTGAT CACGAAGCTC
TATCCGACCA GGTCGCACAC CGGGGCGGCC CAAGGTGGCA TGTGCGCGGC GCTTGCCAAC
GTCGAGGAGG ACTCGTGGGA GTGGCACGCC TTCGACACGG TGAAGGGGTC TGACTACCTC
GGTGACCAAG ATGCCATCGA GATCATGTGC CGAGAGGCGA TCGACGCGGT CATCGATCTC
GAGCACTTCG GGCTGCCGTT CTCGCGCACC CCGGACGGCA AGATCGACCA GCGCCGCTTT
GGTGGCCATA CGCGCAACCA TGGCGAGGCT CCGGTACGTC GCGCGTGCTA CGCGGCCGAT
CGCACCGGTC ACATGATCTT GCAGACGCTG TTCCAACAGT GCGTCGCTCG TGGTGTCCAA
TTCTTCAACG AGTTCCAGGT GTTCGACGTC CTCTTCGAAG GCGAAGGGAA CGATCGGCGT
GCTGCGGGCG TCGTGGCCTA CGAGCTCGCG ACGGGAGATC TCCACGTCTT CGCCGCGAAG
GCGGTGATGT TCGCGACCGG GGGATTCGGC CGTGTCTTTC AGATCTCCTC GAACGCACAC
ACGCTCACTG GAGATGGTCC CGCAGTGCTC CTGCGGCGCG GGGTGCCGCT CGAGGACATG
GAGTTCTACC AGTTCCACCC AACCGGCATC TACGGGATCG GCATCTTGCT CACCGAGGGT
GCCCGTGGCG AGGGTGGCAT CTTGCGCAAC GGACTCGGCG AGCGCTTCAT GGAGCGCGTC
GCGCCGACGG TGAAGGACCT CGCCCCGCGC GACATGGTCG CGCGAGCGAT TCACGCCGAG
ATCCGTGAGG GTCGCGGGGC CGGGCCTGAC AAGGACTATG TCTATCTCGA CCTCACGCAT
CTACCGCCGG AGCAGATCGA CGCGAAGCTC CCCGACATCT CGGGGTTCGT GCGGACCTAT
CTCGGCCTCG AGCCCAAGCG GGATCCGATC CCCATTCAGC CGACGGCACA CTACGCCATG
GGCGGTATCC CGACCAACGT GCATGCCGAG GTCGTCGTCG ACCCGGCGGG GACGGTGCTG
CCAGGGCTCT ACGCGGCCGG GGAGTGTGCC TGCGTGTCCG TCCACGGGGC CAACCGGTTG
GGGACCAATT CCCTGCTCGA CATCAACGTC TTCGGGCGTC GCGGTGGGCG AGCGATGGTC
GAGTACGTCG CTGGCGTCGA TCACCCCGAC ATCGCCCGAG GCGCCGAGGA GCCCGTTCGT
GAGCACATTG AGCATCTTCG GAGCCACAAG GGGTCCGAGC GTGTCGGCGC GTTGCGGACG
ACGCTGCAGG CTGCCATGAT GCGCGATGCG TCGGTCGTGC GCACTGGGGA GTCGCTCGCC
GAGGCCCATC GTGTGATCCG CGAGCTGAAG GAGCGCTACC ACGACGTCGC CATCGACGAC
AAGGGATCGG TCTTCAACTT CGATCTCACG GAGGCGCTCG AACTCGGGAA CCTGCTCGAC
CTCGCCGAGG TGCTCGTGAT CGGTGCGGAG GCTCGCACCG AGAGCCGTGG CGCCCACTGG
CGTGACGACT ACCCCACTCG TGACGACGTG AACTGGATGA AGCACACGCT TGCCTACCGC
GAGCCGGACG GATCGATCCG GCTCGACTAC AAGCCAGTGG TGTTGGGCAA GTACGAACCT
ATGGAGCGCA AGTACTGA
 
Protein sequence
MGVNVHHHSY DVVIVGAGGA GLRAAIETAG TVRTAVITKL YPTRSHTGAA QGGMCAALAN 
VEEDSWEWHA FDTVKGSDYL GDQDAIEIMC REAIDAVIDL EHFGLPFSRT PDGKIDQRRF
GGHTRNHGEA PVRRACYAAD RTGHMILQTL FQQCVARGVQ FFNEFQVFDV LFEGEGNDRR
AAGVVAYELA TGDLHVFAAK AVMFATGGFG RVFQISSNAH TLTGDGPAVL LRRGVPLEDM
EFYQFHPTGI YGIGILLTEG ARGEGGILRN GLGERFMERV APTVKDLAPR DMVARAIHAE
IREGRGAGPD KDYVYLDLTH LPPEQIDAKL PDISGFVRTY LGLEPKRDPI PIQPTAHYAM
GGIPTNVHAE VVVDPAGTVL PGLYAAGECA CVSVHGANRL GTNSLLDINV FGRRGGRAMV
EYVAGVDHPD IARGAEEPVR EHIEHLRSHK GSERVGALRT TLQAAMMRDA SVVRTGESLA
EAHRVIRELK ERYHDVAIDD KGSVFNFDLT EALELGNLLD LAEVLVIGAE ARTESRGAHW
RDDYPTRDDV NWMKHTLAYR EPDGSIRLDY KPVVLGKYEP MERKY