Gene Afer_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0297 
Symbol 
ID8322352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp308548 
End bp309819 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content68% 
IMG OID644951446 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003108939 
Protein GI256371115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0210722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGCG GTCGTGGTGA GCGCCGCGGT TTCGCCGACG CGCGTGCTGC GCTTCGTGTG 
AGGCGCTTCA GTGCATGGTG GGTGGCCCAG CTGCTCTCGG GCATCGGATC CTGGGCTCAG
GCGGTGGCCA TTCCGTGGTA CGTCCTCGAG CGCACCGGAT CGGCCTCGGC CGTCGGTATC
GTCACGACCC TGCAATTCCT GCCGGTGCTC GTGCTGAGCC TCTTTGGCGG GGCGATCGCC
GACCGTGTGT CACGACGTGG CCTCTTGCTC GTCACGCAGC TGCTCTTGGC CTTCTGGGCA
GCGATGCTCG GCTTCCTTGT CGCGAGCCAT GAGGCCCCGA TTTGGGTCGT CGACATCCTT
GCGCTCGCCA TCGGGGCGAC GAACGCGATC AACAACCCGA CCCAGCAGGC ATTCCTGCCG
GAGCTCGTAC CGCGTGAGCT GCTTGCTCCG GCCATCGCGT TGAACAGCGT GCAGTTCAAC
GCAGCACGCA TGATCGGAGG TGCGGTTGGC GGCGCGCTCA TCGCCGCACT GGGAGTCGCC
GCGGCGCTGT GGGTGAACGC CGTCAGTTTT CTGCCGGTCG TGGCCGTCTT GATCCTCATC
GCCTCCCACA GCGCTCGGGC CGTTCGGCGC GAGCGACCCG CCGGCAGCAT GCTGAGCGAG
CTCGGTTCGG GACTTCGGTT CGTGATTGGG GCGGCGCCGG TTCGCAGCGT GGTCCTCGTC
TTCGGCTTCG TCGGCTTGTT CGGGTTCAAC TGGCAGGTCG CCGTACCCCT GGTTGCTCGC
TTTGCACTGC ACGAGCATGC GAACGGGCTC GGGTTGCTCA TGGGAGCGCT CGGCGCGGGA
GCCCTCGTCG CGTCGTTGCT GGCATCAGCG TTGGGACAGG CGACGCAGCG GCGGCTCGTC
GTTGCGGGGA CTGCTCTCGG ACTCTCGCTG ATCGGTCTCG GCCTCGCGCG CTCGATGCTG
GTTGCAGGGT TGCTGCTCGT CGCGGGTGGC TTCTTTGGCG TGCTCGCTTC GGTGAGCGCC
AACACGAGGC TGCAGATGCT CGCTCCGCCG ACGCTGCGTG GGCGAGTCAT GGCGATCTAT
GTGCTGCTCA TGGGCGGTAC GACACCGGTG GGCGCCTTCG TGCTCGGCGA GCTTGCGAGC
TGGCTGGGGT CCGCGTGGGC GGTGCTCGTC TTCGGGGTCG CAACCGCGGC CGGCGTCGTC
GCTGCGAGCC TGTGGGGACG ACAACGTTCG GGATCGAGCG GCCAGCGTGC TGCGACGGCC
CCCATCGACT AG
 
Protein sequence
MAGGRGERRG FADARAALRV RRFSAWWVAQ LLSGIGSWAQ AVAIPWYVLE RTGSASAVGI 
VTTLQFLPVL VLSLFGGAIA DRVSRRGLLL VTQLLLAFWA AMLGFLVASH EAPIWVVDIL
ALAIGATNAI NNPTQQAFLP ELVPRELLAP AIALNSVQFN AARMIGGAVG GALIAALGVA
AALWVNAVSF LPVVAVLILI ASHSARAVRR ERPAGSMLSE LGSGLRFVIG AAPVRSVVLV
FGFVGLFGFN WQVAVPLVAR FALHEHANGL GLLMGALGAG ALVASLLASA LGQATQRRLV
VAGTALGLSL IGLGLARSML VAGLLLVAGG FFGVLASVSA NTRLQMLAPP TLRGRVMAIY
VLLMGGTTPV GAFVLGELAS WLGSAWAVLV FGVATAAGVV AASLWGRQRS GSSGQRAATA
PID