| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0286 |
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| Symbol | |
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| ID | 8322341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 295176 |
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| End bp | 296579 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644951435 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003108928 |
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| Protein GI | 256371104 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.605444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGCTG ACCTCACGAC GCCCACCTCC AAGCCCGTTG CTGGCTCGTC GTTCGCCGAC
CTCGGCGTCC CGGAACCGCT CGTGGCGGTG GCGACGGCCC AGGGGCTGCT CGAGCCGACT
CCCATTCAAC GCGCTGCGCT TCCGGACGCC CTCGCTGGGC GTGATGTGCT TGGCTCGGCG
CCGACGGGAA CCGGCAAGAC GCTCGCCTTC GGTCTTGCGG TGCTCGCACG TGTCAGCGCG
AGCGCACGCG CGAAGCATCC GAGGGCACTC ATTCTCGCGC CCACCCGGGA GCTCGCGATG
CAGATCGCGG ACGCACTCGA TGCCTTCGCA CGTGCAGAGC GCCGCTCGGT CGCGGTCTTC
TATGGTGGGG TTGGCTACGG GCGCCAGCTC CAGCAGCTGC GCCGCGGCGT CGACGTCGTC
GTCGCGACGC CTGGTCGCTT GGCTGATCTC CGCGAGCGTG GCGACGTCGA CCTCAGCCAC
GTCGAGGTCG TCGTCGTCGA CGAGGCAGAT CGCATGGCCG ACATGGGCTT CTTGCCCGAG
GTGCGTCGTC TCGTGCAGGC GACGTCGAGC GAACGTCAGA CGATGCTCTT CTCGGCGACC
TTCGAGGGTC CGGTCGAGAC GCTGGTGCGC GAGCTGTGCC ACGACCCGGT CCGCCACGTC
GTGACGCGAC CGGACGACGA GCAGGGTGAG GTGGGTCACC ACTTCTGGAA CGTCGATCCG
AGCGAGCGTC TCCAGGTCAC GGCCGCCGCC GTGCGAGCTG CGGGACCGGC GGTCGTGTTC
TGCCGGACCC GTCGAGGCGC GGATCGGATC GCGGAGCGGC TCCGCGGCGA GGGCCTTGCG
ACGGCCGCGA TCCACGGCGA TCTCAATCAG CGTCAACGCG AACGCGCCCT CGAGGGCTTT
CGTGCTGGGC GCATCGATGC GCTGGTCGCC ACCGACGTGG CGGCACGCGG CATCCACGTC
GATGACGTGC CGCTCGTGAT CCACTTCGAT CCACCAGAGC GGACGACCGA CTACGTCCAC
CGTTCGGGCC GTACTGGTCG AGCGGGTCGG CGTGGCTCGG TGGTCTCGTT GGTCGGACCA
CGTGAGCGCT CCTTCGTCCG ATCGCTCCAA CGCGAACTCG GGTTGCCGCA CGGTCTTGGA
GCACCGGACG CGGCTCTCCT TCCTGGCTCA GGTCGCGTCG AGCATGTCGG GGGCCGCCGT
CCCGCCGTCG GGCGCGAGGT CGAAGAGTCT CGTGCGGCGA GCGAGGGGCG GGGTGTGCCA
CGTCAGCGCG ATCCGAGAGC CCGCCGTGGC TCTATCGGCT CGCGTCAGGG TGGCGCCGTT
CGGAGCGACG CGCGTAGCGC GCGTGCGGAC GCACCGAGAG GCGGGGCTGC TTCGCCTCGT
CGGCCTCGTC GTCCGGAGCG CTAG
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| Protein sequence | MHADLTTPTS KPVAGSSFAD LGVPEPLVAV ATAQGLLEPT PIQRAALPDA LAGRDVLGSA
PTGTGKTLAF GLAVLARVSA SARAKHPRAL ILAPTRELAM QIADALDAFA RAERRSVAVF
YGGVGYGRQL QQLRRGVDVV VATPGRLADL RERGDVDLSH VEVVVVDEAD RMADMGFLPE
VRRLVQATSS ERQTMLFSAT FEGPVETLVR ELCHDPVRHV VTRPDDEQGE VGHHFWNVDP
SERLQVTAAA VRAAGPAVVF CRTRRGADRI AERLRGEGLA TAAIHGDLNQ RQRERALEGF
RAGRIDALVA TDVAARGIHV DDVPLVIHFD PPERTTDYVH RSGRTGRAGR RGSVVSLVGP
RERSFVRSLQ RELGLPHGLG APDAALLPGS GRVEHVGGRR PAVGREVEES RAASEGRGVP
RQRDPRARRG SIGSRQGGAV RSDARSARAD APRGGAASPR RPRRPER
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