| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0261 |
|---|
| Symbol | |
|---|
| ID | 8322315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 266046 |
|---|
| End bp | 267218 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644951409 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_003108903 |
|---|
| Protein GI | 256371079 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.239081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGC GCGAGGCGGT GATCGTCGCC ACCGCCCGGA CCCCGATCGG CCGCGCCTTC
AAGGGATCCC TCGTCGACGT CCGCCCTGAC GATCTCTCTG GCCTCGTGAT CGCCGAGCTC
CTTACCCGAG TGCCGGCCCT CGATCCGGCG AGCGTCGACG ACGTGATCTG GGGAGCGGCC
ATCCAGCACG GCGAGCAATC CATGAACCTC GGGCGCAACG TGGCAGCCCT CGCTGGCCTG
CCCGAGACCG TCCCCGGCAC CACCGTGAAC CGCTTCTGCG CATCGTCGCT GCAAGCGATT
CGCATGGCGT TCCATGCGAT CATGGCCGAC GAGGGAGACG CCTTCATCGC TGGCGGTGTG
GAGTCGACGA CACGTGCATC GATCAAGGGG TTCGACCCCG AGGACATGAA CCCTCGCTTC
ACCGACGAGA GCCGCGCGGA CTTCGTCAAT CACATGTACA TCCCCATGGG CCTCACGGCC
GAGAACGTCG CCGATCGCTA CGGCGTCACG CGCGAGGCGA TGGACGCCTA CGCGGTCATC
TCGCAAGAGC GTGCGGTCGC AGCCCAGGAA CGGGGCTTCT TCGATGCGGA GACGATCGCC
GTCACGACGC CGAGTGGGAA CGTCGTTCGG CGCGACGACG GGCCGCGCCC CAACACCACC
CTCGAGGTGC TCGCCACGCT CAAGCCAGCG TTCAGGCCCG ACGGACGGGT CACGGCGGGT
AACTCCTGCC CGCTCAACGA CGGGGCTGCA GGGGTCATCG TCATGGAGCG CTCACGCGCG
GAGGCACTCG GCATCCGGCC ACTCGCCAAG ATCGTCGCCT CCGCCGTGAC CGGCATCGCT
CCGGAGATCA TGGGCGTCGG ACCGATCGAT GCCGTACGCG CCGTGCTCGA ACGCGCCGGT
CTCACGATCG GCGACATCGA CGTCGTCGAG CTCAATGAGG CTTTCGCAGC CCAAGTGCTC
CCCGTCGTCA AGGAGACGGG CATCTCGATC GACCACCAAC TCAACCCGAA CGGAGGCGCG
ATCGCGCTTG GCCACCCGTT CGGGATGACG GGGGCTCGGA TCATGACGAC CCTGCTGCAC
GAGCTCGATG AGTTGGGGGC TCGTCTGGGC CTCGAGACCA TGTGCGTCGG TGGCGGCCAG
GGTATGGCCA TGATCGTCGA GCGCCTCGAC TGA
|
|---|
| Protein sequence | MTAREAVIVA TARTPIGRAF KGSLVDVRPD DLSGLVIAEL LTRVPALDPA SVDDVIWGAA
IQHGEQSMNL GRNVAALAGL PETVPGTTVN RFCASSLQAI RMAFHAIMAD EGDAFIAGGV
ESTTRASIKG FDPEDMNPRF TDESRADFVN HMYIPMGLTA ENVADRYGVT REAMDAYAVI
SQERAVAAQE RGFFDAETIA VTTPSGNVVR RDDGPRPNTT LEVLATLKPA FRPDGRVTAG
NSCPLNDGAA GVIVMERSRA EALGIRPLAK IVASAVTGIA PEIMGVGPID AVRAVLERAG
LTIGDIDVVE LNEAFAAQVL PVVKETGISI DHQLNPNGGA IALGHPFGMT GARIMTTLLH
ELDELGARLG LETMCVGGGQ GMAMIVERLD
|
|---|
| |