| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0257 |
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| Symbol | |
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| ID | 8322311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 263394 |
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| End bp | 264182 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644951405 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003108899 |
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| Protein GI | 256371075 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.25957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATG GTGCTGCGCG CTATGTCGTG ACCGGAGCGA CCGGTGCCGT CGGCCGCTCG
CTCGTCACGC GTCTGGTCGA GGGGGGCGCC GAGGTCGCTG TCGTCGTACG CGATCGGGAT
CGGCTCCACG AGCGCCTCGG TCCGGTCGCC GACGCGCTCG CCGCCGTCGA GGTTGCTGAC
GCGCGCGATC TCGAGCGATT CGAGGCGGCG CTGGTGGCGG CAGCCGGTGC CCTTGGTTCG
GTGGACGGCA TCGCCCATCT CGTCGGTGGC TTCCTTCTTG CGACGCCGGC ACGGACCTCG
ATCGCGCAGT TCGAGGAGCT CATGCGCCTC AACCTGACGA GCGCCTTCGT GGTCGTGCGG
GTGGCCGAGC GCGTGATGGG ATCGCGCGGT GGCTCGGTCG TGCTGATCTC CTCGGCGGCA
GCCCACGTCG GCCTCGCCTC GCACGAAGCC GTCGCGGCTT CGAAGGCTGG TGTCGAAGGA
CTGACCCGAT CGGCCGCTGC GACGCTCGCC AGAGCTGGCG TGCGGGTGAA CGCGGTCGCC
CCCGGACTCG TCGAGGCCGA GATGACGCGC GGGATCGTCG AGCGAGAGGA TGCGCTCGCG
GCGTCGATCG AGCTGCACGC CCTGGGTCGC ATCGGCACCG GTGACGAGAT CGCCCGAGGC
GTGGCGTTCT TGCTCGACCC GGAGTCCTCG TGGATCACCG GCAGCGTGCT CGGCATCGAC
GGCGGTCTCG GGTCGGTGCG GCCGCGCCCG CGCCGACGGC TCCCTTCTCA GACCGGGGGC
CAAGGATAG
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| Protein sequence | MSHGAARYVV TGATGAVGRS LVTRLVEGGA EVAVVVRDRD RLHERLGPVA DALAAVEVAD
ARDLERFEAA LVAAAGALGS VDGIAHLVGG FLLATPARTS IAQFEELMRL NLTSAFVVVR
VAERVMGSRG GSVVLISSAA AHVGLASHEA VAASKAGVEG LTRSAAATLA RAGVRVNAVA
PGLVEAEMTR GIVEREDALA ASIELHALGR IGTGDEIARG VAFLLDPESS WITGSVLGID
GGLGSVRPRP RRRLPSQTGG QG
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