| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0242 |
|---|
| Symbol | |
|---|
| ID | 8322296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 244702 |
|---|
| End bp | 246045 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644951390 |
|---|
| Product | glutamine synthetase catalytic region |
|---|
| Protein accession | YP_003108884 |
|---|
| Protein GI | 256371060 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.861179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGACC AGCGCAGTGT CGGCGTCGAC TACGTCCGTC ACATGGCCGA GGATCGCCGG
GTGAAGTTCA TCCAGCTCTG GTTCACCGAT GTGCTCGGCA TCCCACGAGC CTTCCAAATC
ACGCAGGCAG AACTTGCCAC CGCCCTCGAC GAGGGCATGA CCTTCGACGG ATCGGCCATC
GACGGCTTCT CACGCATCCA CGAGGCCGAC GTGCTCGCCA TGCCCGACCC GGCCACGTTC
AGCGTGGTGC CGGGCCTACC GAGCACCGCG AGGATGTTCT GCGACATCTT GAACCTCGAT
CGAACGCCCT TCGAAGGTTG CCCCCGCAAC GTCCTGCGTC GCCAGATCGA CCGCGCCCGA
CAGCAGGGCT ACCTCGTCCA CGCAGCCCCC GAACTCGAGT ACTTCTACCT CCGCGAGACC
ACCCCGGGAC ACTGGGAGCC CCTCGACCAC GGCTCGTACT TCGAGCTGCG ATTGAACGAC
CTCGGGAGCG AGCTGCGCCG CGAGGCGGTC GTGGTACTCG AAGAGCTCGG CATCCCCGTC
AAGCACTCTC AGCACGAGGA TGCGCCGTCT CAGCACGAGA TCGACCTCGC GCCCGACGAG
GTCCTGCAGA TGGCCGACGC CGTCATCAGC GCGAGACTCG TCGTCACCGA GACCGCACGG
GCCAAGGGCA TCACCGCCTC GTTCATGCCC AAACCGTTCG AGGGGCTCCA AGGGTCCGGC
ATGCACACCC ACCTAGCCCT CTACGACCGT CACGACGAAG AACACAACGC CTTCTTCGAC
CCCGAGGCTC CCGATGGTCT CTCGCGCCGG GCACGATCGT TCGTCGCGGG ACTCCTGCGG
CACGCTCGGG AGATCACCGC GGTGACCAAC CAGTGGGTGA ACTCCTACAA GCGCCTCGTC
CCTGGCTTCG AGGCGCCGAT GCACGTCGCG TGGGCACGCA ACAACCGCTC CGCGCTCGTG
AGGGTTCCAA GTCCCGAAGC AGCTCGTGGG GAGGACACGT TCGTCGAGTA CCGCGCACCC
GATGCCGGCG CCAATCCCTA TCTCGCACTC GCGCTCATGG TTGCAGCCGG CCTCCAAGGC
ATCGAACAGG GCTACGAGCT GCCTCCGGAG GTCCACGACA ACCTCTTCAC CATGCCCGAG
CGCGAGCTCG CCTCACTCGG GATCGCCCGT CTTCCCCAGA CACTCTCAGA AGCGCTGGAA
GAGCTCGAAG CGTCGCCCCT GGTTCGCTCG GTTCTCGGCG ACCACGTCAC CGAGTGGTTC
CTCCGCAACA AGCGAGACGA GTGGCGCGCT TCGGCGAGTC AAGTCTCCGA CGCCGAACGA
GCCCGCTACC TCACGCTGAT CTGA
|
|---|
| Protein sequence | MPDQRSVGVD YVRHMAEDRR VKFIQLWFTD VLGIPRAFQI TQAELATALD EGMTFDGSAI
DGFSRIHEAD VLAMPDPATF SVVPGLPSTA RMFCDILNLD RTPFEGCPRN VLRRQIDRAR
QQGYLVHAAP ELEYFYLRET TPGHWEPLDH GSYFELRLND LGSELRREAV VVLEELGIPV
KHSQHEDAPS QHEIDLAPDE VLQMADAVIS ARLVVTETAR AKGITASFMP KPFEGLQGSG
MHTHLALYDR HDEEHNAFFD PEAPDGLSRR ARSFVAGLLR HAREITAVTN QWVNSYKRLV
PGFEAPMHVA WARNNRSALV RVPSPEAARG EDTFVEYRAP DAGANPYLAL ALMVAAGLQG
IEQGYELPPE VHDNLFTMPE RELASLGIAR LPQTLSEALE ELEASPLVRS VLGDHVTEWF
LRNKRDEWRA SASQVSDAER ARYLTLI
|
|---|
| |