| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0235 |
|---|
| Symbol | |
|---|
| ID | 8322288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 239232 |
|---|
| End bp | 240014 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644951382 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003108877 |
|---|
| Protein GI | 256371053 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.998235 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCTGC GCGACAACCC GACGACCGGG CTCGAGGTGC TCATGCTCCG TCGATCGAAG
GACGCCGCGT TCGTCGCGAG CACCTACGTG TTCCCGGGCG GGTCGCTCGA CGCCGAGGAC
GAAGCGCTCG TCGCCGACGG TCTCGTGCGC TCGGGTGCCG ACCTCGCAGC GCACATGCCC
GACGAGCCCC GTGCTGCGGC CCTCGGTGTC GCCGCGGTCC GCGAAGCGTT CGAAGAAGCG
GGCGTGCTGT TGGGTGCCCA GGTGTCGCTC GGGGCCGATC GTCTGGGCGA ACTGCGCCAG
CGTCTGCTCG CCGGCACCAT CGGCTTCCGC GAGGTCGTGC GAGCGGTCGA GGGAATCGAC
GTGGCCGTGC TCGGCTACGT CGCCCACTGG GTGACCCCGG CTGGGAGTCC ACGGCGCTTC
GACACGCGCT TCTTCGTGGC AGCAGCGCCG AGCGACCAGG ACGCGTCCGC CGACGCCGGG
GAGGTCACCG AGGCTCGCTG GCTCGCGCCG AGCCAAGCCC TCCGAGACCA CGAGGCAGGT
GCGCTCCCCA TGGTCCCGCC GACGGTGGCG AACGTCACGT TCCTCGCCGA CGTGGGCTCG
GTCGCCGAGG CACTCGCACG GGCCCGAGCG CTCGAGCGGG TGCCGCGGAT CGAGCCGCGC
CTCTGGCGCG ACGGCGACGT CGTTCGCATC CTCTTGCCCG GCGACCCACG CTATGGGCTC
GTCGAGCCCA CGCGACTCGC CCCTGGCGAG ACACTGCCGG TCGAGTCGGC GGGTGAGCCA
TGA
|
|---|
| Protein sequence | MVLRDNPTTG LEVLMLRRSK DAAFVASTYV FPGGSLDAED EALVADGLVR SGADLAAHMP
DEPRAAALGV AAVREAFEEA GVLLGAQVSL GADRLGELRQ RLLAGTIGFR EVVRAVEGID
VAVLGYVAHW VTPAGSPRRF DTRFFVAAAP SDQDASADAG EVTEARWLAP SQALRDHEAG
ALPMVPPTVA NVTFLADVGS VAEALARARA LERVPRIEPR LWRDGDVVRI LLPGDPRYGL
VEPTRLAPGE TLPVESAGEP
|
|---|
| |