| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0205 |
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| Symbol | |
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| ID | 8322258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 209473 |
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| End bp | 210630 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644951352 |
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| Product | AAA ATPase |
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| Protein accession | YP_003108847 |
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| Protein GI | 256371023 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.519462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTAG GTTGGCAGGA CTCGACCCGT GCGCTCTCGG TGCTCGCGTT TGCGCCCACG
CCTCCGCCGC AGCCGGCGCC GAGCACCGTC GTCGGGATCG CTGGCAGTGG CGGACTGTTT
CGCTTCGACG CCTTCGACCT CTACACCCAT GGGTGGCTGA CGAATCCCAA TGTGCTGATC
CTCGGCGACG TCGGCCGCGG CAAGAGTACG CTCGTGAAGC TGCTCCTCGT CCGGTCTGCG
ATCGCGGCCT CCGGCAGCTT GCTGGTGCTC GATCCGAAGG GCGAATATGG CGCCGTCGCT
CGCGCCGTCG GCGCGAGCGT CATGCGCCCG CGCGCGGACC ATGGCGGGAT CGATCCCCTC
GCTGGCTCGC TCGATCAGCG AGAGCGGGCT CGCGCCCTCG GCAGCGTGCT CGAAGCGTTG
TGTGAGCGTC CGCTCGACGA GCTCGAGCGG CGTGCGGTGT CGGCCGTGTG CGTGGGACCG
CTCGCGGGGC TCGCCGACGC CGCTCGACGC CTCGCGGCGC TTGACGCAGA GGTGTTCGAT
GCGCGACTTG CCAGTGCCGG TCTCGAACGG GCGGCGCGGC TGGCGCTGTG GCTCTCGCGC
GTCGTCGACG GGGATCTCGC GGGGATCTGG GAGACGCGAG GTGGGGGGAG TGCGCTGGCT
CCGCGGGTCG TCGTGGATCT CAGCGACGTC GGCGCCGAGC GTTGGGTTCG GATCGCGGTC
GCAGCACTCC TCCGCATGCG GTTGGCGCAG CTTGGCAGCG GTGAGGTTGC AGGTGGGCTC
GTGGTCGTCG ACGAGGCATG GACGCTCGCG AGCGAGACCA GTACGCGAAC GCTGCTCGTG
CGAGCGCTCA AGCTGGCGCG CGCCTACGGC GTCAGTGTGG TCGCGGTGAC ACATCGCCTA
GCCGACGTCG CCGGTGCGAT GGATCTCATC GGCGACGTCG GTACCGTCGT CGCCTTCGGA
CAGTCGTCGT CTGCAGCCCA GGACCTCGTC ACTGAGCTCC ATCTCGACGA GCGCGTGCGC
GAGCTGGTCG CCGGTCTCGG GCGCGGTGTC GCGCTGTGGC TCCTCGGGGG ACACAGCTGG
CTGGTCCGGC ACGTCGTTCG GGAGGAGGAG GTCGCACTCG TCGACACCGA CGCGCGGATG
CGGGCTCCAG CACCATGA
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| Protein sequence | MDLGWQDSTR ALSVLAFAPT PPPQPAPSTV VGIAGSGGLF RFDAFDLYTH GWLTNPNVLI
LGDVGRGKST LVKLLLVRSA IAASGSLLVL DPKGEYGAVA RAVGASVMRP RADHGGIDPL
AGSLDQRERA RALGSVLEAL CERPLDELER RAVSAVCVGP LAGLADAARR LAALDAEVFD
ARLASAGLER AARLALWLSR VVDGDLAGIW ETRGGGSALA PRVVVDLSDV GAERWVRIAV
AALLRMRLAQ LGSGEVAGGL VVVDEAWTLA SETSTRTLLV RALKLARAYG VSVVAVTHRL
ADVAGAMDLI GDVGTVVAFG QSSSAAQDLV TELHLDERVR ELVAGLGRGV ALWLLGGHSW
LVRHVVREEE VALVDTDARM RAPAP
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