Gene Afer_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0183 
Symbol 
ID8322236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp190753 
End bp191730 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content69% 
IMG OID644951330 
ProductTransglycosylase domain protein 
Protein accessionYP_003108825 
Protein GI256371001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.831864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCAC GTATGACAGA AGCTCATGGA TGGGCGCAGT GGCGACGAGC TGCTGCGACG 
CTGGCGCTCC TCGTGAGCGG TGGCTTTGTC GCGCGTTGGG GCTCGACGGC CCCGTCGTCG
TCCGTGCAGT CGCTGCAGGC TCAGGCACAG GTTATCGAGG CACAGCTTGC CAACCTGGGG
GCCTCGGTGC ATGCCATCAC GGTGCAGATC CAAGAGACTC AGGCCGCGAT CGCGGCCAAC
GAGGCCTCTG AGGCCATCCT CGAGGGGCAG CTACGAGCCG AGCACGCTGC GATCGCGCGG
TCGCGTCGAG TCCTGGTGAC GGCCGCTGAT CAGCAGTTCG TGACGGCAGG CCAATACTCG
AGCGTGTTGG CGTCGCTGCG GTCGAACTAC AGCTCGGTCG GGCTGACGCA GGGCTACGAG
CAGGTCGCTT CCTCGTCGAT CACCCAGGCG CTCTCGGCCT ACGAGCAGGC CGGTCTCGAG
ATCGAGGTGA CGCAGGCAGC GCTCGCGGCG CGCGTTCGGG CAACCGAGGC CGAGCTGGTG
CAGGATCAGG CGCAACGCGC TCAGCTCAGC CAACGGGTTG CGGCCACCGA GGCCGAACTG
GCCCAGGTGC ACTCGCAGCT GGCCTCGGCC ATCGCGGCTG AGGCGGCAGC TCCCTTGCCG
GCTCCCGGCG GAGCGGCCCA AGCCGTCCAG GTCTTGCTGG CTCCGCCGCC GCCCTCGCCG
ACGTCGCTGT CGGGGCCCGC GACCGCCGCG CAGCTCCTCG CGTTGCGCGA CTGCGAGTCC
GGGGGCAACT ACCAGGCCGA CACCGGCAAC GGCTACTACG GTGCCTACCA GTTCGCGGCC
AGCACCTGGG CTGCGCTGGG TTACGGTGGC CTGCCCAACC AGGCTCCGCC AGCGGTGCAA
GACCAAGCCG CCGAGCAACT GCTGGCTCGA GCTGGCTGGG GTCAGTGGCC GGTGTGCTCC
GTCCTGATCG GCATGTAA
 
Protein sequence
MAPRMTEAHG WAQWRRAAAT LALLVSGGFV ARWGSTAPSS SVQSLQAQAQ VIEAQLANLG 
ASVHAITVQI QETQAAIAAN EASEAILEGQ LRAEHAAIAR SRRVLVTAAD QQFVTAGQYS
SVLASLRSNY SSVGLTQGYE QVASSSITQA LSAYEQAGLE IEVTQAALAA RVRATEAELV
QDQAQRAQLS QRVAATEAEL AQVHSQLASA IAAEAAAPLP APGGAAQAVQ VLLAPPPPSP
TSLSGPATAA QLLALRDCES GGNYQADTGN GYYGAYQFAA STWAALGYGG LPNQAPPAVQ
DQAAEQLLAR AGWGQWPVCS VLIGM