Gene Afer_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0174 
Symbol 
ID8322227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp183538 
End bp184509 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID644951321 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003108816 
Protein GI256370992 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.170395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTGC TCGAGGTTCG CGATCTCGTC GTCGATTACC GCATGGGCAC GACCGTCGTG 
CACGCGCTCC GAGGCGTCTC GCTCGAGGTC GACGAGGGCC AGTTCATCGG CGTCGTCGGT 
GAGTCGGGCT GTGGCAAGAG CACGCTCGGC ACCGCGGTCG TCGGTGTGCT CGGTCCCCCT 
GGCTTCATCG TCGGTGGGTC GATCCGCTTC CGCGGTGTCG AACTCGTGGG TCTCGACGCC 
GCCCAGCGGC GGGCCCTGCG CCATCGAGGG CTCGCGCTCG TCCCACAGGC CGGCATGAAC 
GCCCTCAATC CGGTCCGCTC GATTGAGGGG CACTTTCGAG ACGTGCTCGC CGGTACCGGT 
GTTCGTCACC GAGCAGAGGT CCGAGCTCGC GCCGTCTCCC TGCTCGAACA AGTTGCGCTC 
GCGCCGTCGG TCTTGCGCAG CTATCCCCAC GAGCTGTCAG GGGGCATGCG CCAACGGGTT 
GCGCTCGCCC TGGCGCTCGC TCTGGAACCC CAGCTCGTGG TCTTCGACGA GCCGACGACG 
GCGCTCGACG TCCTCGTGCA GCGCTCGGTG GTCGATACCA TCCGATCGCT GCAGCAAGCG 
AGGGGCTTCG CCGCCATCTT CATCAGTCAC GACATCGGTC TCGTCGCGAG CCTTGCTTCG 
CGAGTGGACG TGATGTACGC AGGTGAGGTG GTGGAGGCGG GACCAACCGA GCGTGTCGTG 
GCACGACCGC TGCACCGCTA CACCGAGGCG CTGCTGGGCT GCTACGCCGA CCCTCGGGCG 
GAGGAGGTCA CGGTGCGTGG CATTCCGGGG AGCCCGCCGA ACCTCGTTGC GCAGATCGAA 
GGGTGCGCGT TCGCGCCCCG CTGTGGCGTC GCGAGCGACG AGTGTCGTTG CCCCCTGCCG 
ACGGTGACGC TCGACGACCA GTGGGCACGC TGCGTGCATC CAGCCGTGGC GGTCGAGGGA 
CGGTCCCGAT GA
 
Protein sequence
MSLLEVRDLV VDYRMGTTVV HALRGVSLEV DEGQFIGVVG ESGCGKSTLG TAVVGVLGPP 
GFIVGGSIRF RGVELVGLDA AQRRALRHRG LALVPQAGMN ALNPVRSIEG HFRDVLAGTG 
VRHRAEVRAR AVSLLEQVAL APSVLRSYPH ELSGGMRQRV ALALALALEP QLVVFDEPTT 
ALDVLVQRSV VDTIRSLQQA RGFAAIFISH DIGLVASLAS RVDVMYAGEV VEAGPTERVV 
ARPLHRYTEA LLGCYADPRA EEVTVRGIPG SPPNLVAQIE GCAFAPRCGV ASDECRCPLP 
TVTLDDQWAR CVHPAVAVEG RSR