| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0172 |
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| Symbol | |
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| ID | 8322225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 181635 |
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| End bp | 182615 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644951319 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003108814 |
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| Protein GI | 256370990 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.774382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCGCTACG TCGTGCGCAG GCTCGTCATC TTCGTACTGA CGCTCTGGGT CGCCCTCACG
CTGAACTTTC TCATCCCTCG CCTCATGCCG GGCAACCCAG CTCAGGCAGC GCTCGCCAAG
TTGGCGGCTC GCGGACCGGT GAGCCCTACC GAGCTCCACG CCATCGAGCT CACCCTCGGG
TTGCCCCATG GCTCGTTGCT CTCGCAGTAC GGTGGGTACC TCGTTGCCCT CGCGCATGGA
CACCTTGGCG TCTCTTACAC GTTCTTCCCG GAGTCCGTTC GCTCCCTGAT CGCTCAAGCT
CTGCCCTGGA CCCTTGGCCT CGTCGGTACG ACCACTGTGT TGGCGTTCGT CGTCGGCACC
TTGCTCGGTG TGCTTGCGGC CTGGCGCCGA GGCGGCATCA TCGACACCGT CGCCACCGTC
GGCTCGACGT TCACCGCGGC CTTCCCGTAC TTCTGGACCG CGCTCCTCGC GCTCTACGTG
CTCGGTTTCG TGCTGGGCTG GTTCCCGATC CGAGGTGGCT ACGCCTCCAC GCTCAGCCCG
ACCTGGAGCC TCGGTTTCAT CGTCGACGCG GCCTACCATG CGATCCTGCC GGCCGCGACG
ATCCTCGTCT CGAGTCTTGG CGGCTGGTTG CTCGGCATGC GCAACACCAT GATCCCGACC
CTCGGTGAGG ACTACGTCAC GTTCGCCGAG GCCAACGGGA TTCCCTCGCG GACGGTGGCA
CTGCGCTACG CCGCGCGCAA CGCGATCTTG CCGAACGTGA CCGGCTTCGG CCTCGCGCTC
GGGTTCGTCG TGTCGGGGTC GTTGCTGACC GAGGTGGTGT TCGGCTATCC GGGCGTGGGA
TCGTTGCTCT ACAACGCCGT CGTGAACGAG GATTACCCGC TGATGCAGGG CCTGTTCCTC
GTCATCACGG TGAGCGTGTT GGTCGCCAAC CTGATCGTGG ACCTGCTCTA CGGCGTGCTC
GATCCGCGGG TGCGCCGATG A
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| Protein sequence | MRYVVRRLVI FVLTLWVALT LNFLIPRLMP GNPAQAALAK LAARGPVSPT ELHAIELTLG
LPHGSLLSQY GGYLVALAHG HLGVSYTFFP ESVRSLIAQA LPWTLGLVGT TTVLAFVVGT
LLGVLAAWRR GGIIDTVATV GSTFTAAFPY FWTALLALYV LGFVLGWFPI RGGYASTLSP
TWSLGFIVDA AYHAILPAAT ILVSSLGGWL LGMRNTMIPT LGEDYVTFAE ANGIPSRTVA
LRYAARNAIL PNVTGFGLAL GFVVSGSLLT EVVFGYPGVG SLLYNAVVNE DYPLMQGLFL
VITVSVLVAN LIVDLLYGVL DPRVRR
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