Gene Afer_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0168 
Symbol 
ID8322221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp175731 
End bp176504 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID644951315 
ProductMgtC/SapB transporter 
Protein accessionYP_003108810 
Protein GI256370986 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0240664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCACC TCGCCGCTCC CCTCGTCCCA GGGGTGACCT GGACCTTCCT CGTGCGCTCC 
GTCCTCGCTG CGCTGTTCGG TGCGATCGTC GGTGCCGAAC GCCAGTGGCG CTCGCGCATG
GCAGGGCTAC GCACGAACGC CCTCGTGGCG CTCGGCGCCG CCCTCTTCGA ACAGCTCTCG
CTGCTCCTTG CCACCAGCCC CATCGCCGCG ACGGCACACG AATCGGTGGA CTTCACGAGG
GTCACCGCCT ACATCGTCTC GGGCATCGGG TTCCTCGGTG CCGGCGTCAT CATCCGCGAT
GGCGTGAACG TGCGCGGCAT CAACACCGCA GCCACGATCT GGTGCGCGGC CGCCATCGGC
GCCCTCACGG GCACTGGCTA CCTCATGTTG GCGCTGCTGG CTGCGCTCAC GGTCCTCGCA
GCCCACGTCG GGCTACGGCC GCTCGCCCGC ACCCTCGACC GACGTCCGCA GCGCGAGGCC
GAAGAGGTGC GCTTCGAGTG GACGCTCTCG GTCGTCTGTC AAGAGCCAGC CGAAGCCCAC
ATCCGGGCGC TCATCACCCA AGCAGCCTCA GCCGGCGCGT TTCGGCTCCG CGGCGTGCGC
AGCCAGGAGC TGCGTCATGA GCCCGGCCTC GTGCTCGTCG AGGCAGACCT CGTCGCCGAA
GGCCAGGACG ACCTCGCCGT GGAACAAGCC ATCTCTCGCC TCAGCCTCGA ACCCGCCGTG
AGCTCGGTGA GCTGGCGGTC TGCCGACTCC GAGGCGCGCG ACGCCTCGGA GTAG
 
Protein sequence
MRHLAAPLVP GVTWTFLVRS VLAALFGAIV GAERQWRSRM AGLRTNALVA LGAALFEQLS 
LLLATSPIAA TAHESVDFTR VTAYIVSGIG FLGAGVIIRD GVNVRGINTA ATIWCAAAIG
ALTGTGYLML ALLAALTVLA AHVGLRPLAR TLDRRPQREA EEVRFEWTLS VVCQEPAEAH
IRALITQAAS AGAFRLRGVR SQELRHEPGL VLVEADLVAE GQDDLAVEQA ISRLSLEPAV
SSVSWRSADS EARDASE