| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0158 |
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| Symbol | |
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| ID | 8322211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 163577 |
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| End bp | 164749 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644951305 |
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| Product | type III secretion exporter |
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| Protein accession | YP_003108800 |
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| Protein GI | 256370976 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCC AGGAGGGCAC CGAAGAGCCA ACCCCGCGAA AGCTCGAGCG GGCGCGCAAG
GAGGGGATGG TCGCGCGCTC GGTCGACCTC GTCTCGTTCG TCGTGCTCCT CATCGCGTCG
TTCGCCCTCC CGCTCGCCGT GCGCGATGCG AGCGTGCGCA TCGGCGACGT CGCGGCCGCA
GCGTGGTCGG GCGCGATCCC CGCCACGAGC GCCGGGGCGT TGCGCTTTCT CGGCACCGGT
CTCGATCTCG TGGTCCAACT GGTCGGGCCG GTCGCCGTCG TTGCGGTGGT CATCGTCGCG
GTCGGGAACC TTGCCCAGGT CGGGCTGCGC TTCGTCCCGA AGCGACTCCG ACCACGCGCC
GAGACCTTCT CGCCCGCGGC CAACCTGCGT CGGATCTTCT CGGCCCAACC CGGGATCGAG
GTCGCCAAGG CGATCGTCAA GCTCGTCGCG ACGGCGGCCG TCGCGGCTGC CATCGTCTCC
AGCAGCATCG ACGCCATGGC TCAGGGTGCA TCCTCACCGC TTGCGGCGGC GGATGCCGCC
GCTGGTGCCT CTCTCGAGCT GGTCCGTGTC GTCGCGGTCC TCGGGGTCGT CCTCGGCATC
GTCGACCTCG TGCGCCAGCG TCGGTCGCTG CGGCGCAGGC TGCGGATGAC CCGCCACGAG
GTACGTGACG AGTTGCGCGA GCACGAAGGA GATCTCGCCG TCAAGGCACG CCGCCGGCGC
TTGGCGCGTG AGTTCGTTCG ACGGGCCATG CTCGCCGACG TCGCCCAAGC CGACGTGGTT
GTGGTCAATC CGACGCACGT GGCCGTCGCG CTGCGTTACG ACCCTCGCCG TGATCGTGCT
CCGACCGTCG TCGCTAAGGG CCTCGATCAC TTGGCGATGA CCATACGCGA GCGTGCGCGT
GCCGCTCGGG TGCCGATCGT CGAGGACCCC CCGCTCGCGC GCGTCGTCTA CGTCGCCTCT
CGTGTCGGAG AGCCGATCCC TGCATCGCTG TTCCTCGTCG TCGCGAGGCT CCTCGCGTTC
GTCTATCGAC TGCCGTCGCT GGCGCGCTCG TTCGACTCAC GCCACGTGAC CCGTTCCGAC
GACATTCCGG TCGATCTCGC CGCTCGGGCC TGGAGTCTGC TCGCCGACGA GATCGATACT
CAAGGCGACG TGCACGCGGG CCGAGAACGC TAG
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| Protein sequence | MARQEGTEEP TPRKLERARK EGMVARSVDL VSFVVLLIAS FALPLAVRDA SVRIGDVAAA
AWSGAIPATS AGALRFLGTG LDLVVQLVGP VAVVAVVIVA VGNLAQVGLR FVPKRLRPRA
ETFSPAANLR RIFSAQPGIE VAKAIVKLVA TAAVAAAIVS SSIDAMAQGA SSPLAAADAA
AGASLELVRV VAVLGVVLGI VDLVRQRRSL RRRLRMTRHE VRDELREHEG DLAVKARRRR
LAREFVRRAM LADVAQADVV VVNPTHVAVA LRYDPRRDRA PTVVAKGLDH LAMTIRERAR
AARVPIVEDP PLARVVYVAS RVGEPIPASL FLVVARLLAF VYRLPSLARS FDSRHVTRSD
DIPVDLAARA WSLLADEIDT QGDVHAGRER
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