| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0137 |
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| Symbol | |
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| ID | 8322190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 147159 |
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| End bp | 148700 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644951284 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_003108779 |
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| Protein GI | 256370955 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCATCCC AGGACCTCCT CGCCAAGGCG CGCGACTCGC TCCGGCGCTT CGCGAGCGGC
TTCACCACCG GCCAGAAGGC CGTGGTCATG GTCGGCATCG CACTGGTCGT CGCGATCGCG
GTTGCGCTGG CATCGCTCAC GTCGAGCCCG AGCTACGGCG TGTTGTTCTC GGGCCTGTCG
GCCCAAGATG CCGGCTCGAT CACCGCGAAG CTCCAGTCGG CGGGGGTTCC CTACGAGCTC
ACGAACGGCG GTACGACGGT GCTCGTTCCC CAGAACCTCG TCGACCAGGA GCGGGTCTCG
CTGGCCGAGG CCGGGCTTCC GTCCCAGACC GCGGGGCTGA CGTCGCTGAA CGGCCTGTCC
ATCACGAGCT CGCAGATCAC CCAGCAGGCC GATTACCAGG CGGCACTGCA GTCGCAGCTC
GCTCAGACCA TCGAGGCGAT CAACGGCGTG CAGTCGGCAC AGGTGAACCT CGCCCTGCCG
CCGACGGACG CCTTCGCGAT CGGTCAGTCG TCTCAGCCGA GTGCCTCCGT GATCGTGACG
CTGGACGCGG GCGTGTCGCT CACGTCCCAG CAGGTCGAAG CGATCGTCCA CCTGGTGGCG
AGCGCCATTC CGGGGATGAA CGCCAACGAC GTGACGGTGG CCGACCAGAA CGGTGACGTG
TTGGCAGCGC CGGGTCTCGG CGTCAACGCC CAGGGCGCCG GTCAGTCGGC GCAGGGCTTC
GACTCTCAGC TCGAGGCGTC GATCCAGTCG ATGCTCGACA CGATCGTCGG CCCCGGCAAC
GCGAACGTCC GCGTCGCGGC CACGCTGTCG ACGAACCAGG TCACGACGAA GACCCAGTCG
ATCCAGACGC AGAAGGGCAA GCCCCTCACC ACGCCGACCC AGACCCAGAC CCAGACCCAG
ACCTTCACCG GGAACGGCAC CGTGCCGGGC GGCACGCTCG GCACCACTGG GATCGCGACC
ACCGGCAACC AGGTGTCGAC CTACAAGCAG ACCTCCTCCA CGACGCAGTA CGCGATCGGT
CAGGTCACCC AGACGGTCCA GCAGGCACCG GGCGCGATCC AACGACTCAG CGTGGCGGTG
GCGGTCAACT CGCACGTCAA GGGTCTCTCG TTGGCGAAGC TGCGCCAGGT CGTCGCGGCC
GCAGCCGGGA TCGTACCGGC ACGTGGCGAC ACGCTCTCGG TCGTCGCGGT GCCGTTCCCC
GCGCTGGCGA CGACGCCGTC GGGTGCGGGG TCGTCGCTCT TCGGGTCGAT CCTCGGCATC
GCGAAGGTGG TCCTGCTCGT GCTGGGAGCG CTCGGTGCGA TCTTGCTCAT GTCCCGTGCA
GCGGCGCGGA CCGAGGTCGA GCCGTTGTTC CCGGCTGAGC TCGAGCCTGC TCTCGCGGGA
ACGGGTGGCC AGCTCGCCGG ACCCACCGAG GAACTGCCCG CGGTCGCCTT GCCCCAGAGC
CAGCCGGTCG TCGGCGAGGA CGTGCTCGAC TACATCGATC GCCAGCCCGA GGACGTCGCG
AAGCTCTTGC GGGTGTGGAT GACGGCGCGG GGTCGCAAAT GA
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| Protein sequence | MASQDLLAKA RDSLRRFASG FTTGQKAVVM VGIALVVAIA VALASLTSSP SYGVLFSGLS
AQDAGSITAK LQSAGVPYEL TNGGTTVLVP QNLVDQERVS LAEAGLPSQT AGLTSLNGLS
ITSSQITQQA DYQAALQSQL AQTIEAINGV QSAQVNLALP PTDAFAIGQS SQPSASVIVT
LDAGVSLTSQ QVEAIVHLVA SAIPGMNAND VTVADQNGDV LAAPGLGVNA QGAGQSAQGF
DSQLEASIQS MLDTIVGPGN ANVRVAATLS TNQVTTKTQS IQTQKGKPLT TPTQTQTQTQ
TFTGNGTVPG GTLGTTGIAT TGNQVSTYKQ TSSTTQYAIG QVTQTVQQAP GAIQRLSVAV
AVNSHVKGLS LAKLRQVVAA AAGIVPARGD TLSVVAVPFP ALATTPSGAG SSLFGSILGI
AKVVLLVLGA LGAILLMSRA AARTEVEPLF PAELEPALAG TGGQLAGPTE ELPAVALPQS
QPVVGEDVLD YIDRQPEDVA KLLRVWMTAR GRK
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