Gene Afer_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0118 
Symbol 
ID8322171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp128605 
End bp129324 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID644951265 
Productputative ABC transporter transmembrane protein 
Protein accessionYP_003108760 
Protein GI256370936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.445398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCTCGA CGGTGCTCAC GCTGGTGTTC ATGGTGGTGC TCGGGGTCGG GATCTCGGCG 
CTCGGCGCGC TCGCCGTGCA CGCAGCCGTG TCGCACCACC GCATCGGCCC CGGCTTCGAT 
CCGGTCGCGC GCTCGCTCGG CGGGATGCTC ATCGCGCAGA TCGCCATCGG TGTCCTCGGC 
GTCTTGGTCT TCAGCGCTGA GGTCGCGAGC GGGACGATCA GCCAGACGTT CGCCGCGGTC 
CCCAAGCGCT GGCACGTGCT GCTGGCCAAG GTACTCGTCT ACTTCGTGAT CGCGCTCGTT 
GCCTCCGAAG TAGTGTCCGT GGCGAGCTTC CTCGTGGGCC AGGCCGTCAT GCACGGAGTC 
GTCCCGACGA CCAGCCTCAC GAACGCGACG GCGATGCGGG CCGTCCTGGG CACCGGGCTT 
CTCGTCGCGA TCGTGGGTGT CCTTGCGCTC GCCATCGGTG TCATGATCCG TCGTACTGCT 
GGGGCGATCA CCACCTTCGT GGGCGAGTAC CTGGTGCTGC CCTTGCTCGT GACCGCGCTC 
CCGTCGCCGT ACTCCACCGA CATCGAAAAG TTCCTGCCGT TCCAAGCAGC CCAGGTCATG 
ATGTCCTCGC AGCTCGTCGC GAACAGCTTG TCCGCGTGGG TCGGCCTCGC CGTCGTGGCG 
GGCTACGCCG TGATCGCCGT CGTCGTCGCA GGGTCGCTCC TCTCGTCGCG CGACGCCTAG
 
Protein sequence
MRSTVLTLVF MVVLGVGISA LGALAVHAAV SHHRIGPGFD PVARSLGGML IAQIAIGVLG 
VLVFSAEVAS GTISQTFAAV PKRWHVLLAK VLVYFVIALV ASEVVSVASF LVGQAVMHGV 
VPTTSLTNAT AMRAVLGTGL LVAIVGVLAL AIGVMIRRTA GAITTFVGEY LVLPLLVTAL 
PSPYSTDIEK FLPFQAAQVM MSSQLVANSL SAWVGLAVVA GYAVIAVVVA GSLLSSRDA