Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0107 |
Symbol | |
ID | 8322160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 115009 |
End bp | 117996 |
Gene Length | 2988 bp |
Protein Length | 995 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644951256 |
Product | Methyltransferase type 11 |
Protein accession | YP_003108751 |
Protein GI | 256370927 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTATCT TCGTCGAGGG GGCAACGGCC CACGACAACT CCTACGGCAT CGTGAACCTG CGCCTTGCCG AGGCGCTGCG CGCTCGTGGT CATGCGGTGT ACGTGCGCCC GTGGGACCAA TCGTTGCGGG GAGCTGGCAC GAGCGCACGT GAGCTCGACA TCGAGCCCTT CGATCTCGGC GTCGGCCACG CCGACGTCTG GGTGCGACAG GTGTGGCCGC CGTCGTTCGA GCGTCCCGAC GCCGAGCGCG CCTTCGTCAT CCAACCCTTC GAGCTTGGCG CGGTGCCGGC GAGGTGGGTC GTCGAGGCAG GTCAGCTCGA TGGCATCCTC GTCCCCTCAC TCTTTGCCAA GCAAACCTGG CTCCAAGGCG GGGCGGATCA TCGCCACCTC TGGGTCGTTC CGAACGGCGT CGTCGTACCT GCCCTCGTCG AGTCCTCAGA ACCGAACGGT GATCGCCTGA CGGTGGGCTA CGTGGGCGGC GCCATCTGGC GCAAGGGTAT CGACATCCTC ATCGCTGGTC TCGACCTCCT CGATGACGCC ACGCTGCAAC GGATCGAGCT CATCGTCAAG GTCGCAGGTC ATGACACCTA CTACGCCGGC CAGTCGTTGC TCGAGCGCGA GCTGCTCGCC CATCCTCGTG TCGCCGCTCG GACGGAGATC ATTCGCGCGA GCCTGTCGCA GGCGCGGCTC GATGCCCTCT ACCAACGCTT CGACGTGCTC GCGGCTCCCT ACCGTGCCGA GGGGTTCGCG CTGCCGATCC TCGAGGCGAT GGCTCACGGG GTCGTCCCGA TCGTGCCGGA CGCCGGGCCT GCGCCAGAGT TCGTCGACCG GAGCTGTGGC GTGTTGCTCG CGAGTCGCCC CCTCATGGTC GGTGGCCCTG CCGATGAGTT CCTCGGTCCG GCGCTCGGAC CACGGTGGGC CATCGAGGTG GACCCCTGTG ACGTCGGCTC CGCTGTGGCC GCGCTGCTGG AGGACCCCGG CGCCCGGGCT GGGCGTGCGC GAGCTGGGCA GGAGCGAGCC CGGGCCTGGA GCTGGGATCG CGCCGCAAGC ATCCTCGAAG ACGTCGTGAG GGCGCTGGAC GCCGACGAGG CACCCACCGA TGCGTCGTCT CGACTCCTCC TCCGTGCGAC ACGGGGTGGT CCGCAGGCGA TCGGTGCGCT CGTCGAGCTG GGTGACCTCC ACGGCGCCCG CGAGCTCGCT GCGGTGACCC CAGGCGCCGA GGCGGTGCGA GCGAGACTGG AGGGGCTCGC GGCCACTCGC CCGGACGTGT GGTGGGGTGC GCGCCATCGC GCGCCGATCC CCGCTCGGGC CGAAGCACGG TCGTCGTGGC ACGCCGGCGA AGGCGACCTC GCCATCGTGA CGCGTGTCGC GCGCTACCTC GCTCCACTGC TTGCGATCGG AGGCGGTCGC GTCCTCGACG TCGGGAGCGG CCATGGCGCG ATGCTCGGTC AGCTCCGGTC GCTCGGGGTT CGTGCACTTG GGATCGAACT CGATCCAGCG AGAGTGGAGC ACCTGCGTGC GAGTGGGTTC GACGTCCTCG AGGGCGATGC GCTCGAGGTG CTCGGCACCT TGGAGACGGG GAGCTTCGGC GGAGCCTTCG TGGGCCACCT CGTCGAGCAC TTCGCGCCCC AGGAGGTCGT CACGTTGCTC GCCGAGCTCG CTCGTGTCGT TCGCACGGGT GGCGTCGTGG TGATCCAGAC CCCGGATCCG CAGGCAGAGG GAGTCATGCA GCAGACGTTC TGGCTGGATC CGACGCACGT GCGCCCGTAT CCGGCGATGA CGATCGCCGC GATGGCGGCC GAGGCCGGTT TTGCCACTGT TGGGGCACTC GAGCGATCGC TCGCACCGCT CGTCACCGAC ACGCTCGTCG TGCTGCGTCG TCGTGCCGAT GCGCCCGTCA TCGCGCCTCG GAGGGTGGCA GCGGTGGCGC CGGCGGTGGT CGTGGTGGCC GACCCTCACA GTGGATTCCG GCGAGCCAGC GACGCGCTCC TCGGCGAGCT CAATGCGATG GGCGTGGGCG TGCGGGCAGA GCCCCTCGTG GGGCCGCGGT CGGACCGCGT GTTCATGCAC GATCTCCCGA TTGGTTCGTT GGCCAGCGGC CTCGTGGGTA CGGCGCTCGT TGCGCGTACC GCGTGGGAGG CGAGGGGCCT GCCACGAGAG CTGCGCCGTA CGCTCGCGCG CTATCGCCGC ATCCTCACCT ACTCACACTG GAGCCGCGAC GTGTTCGTCG AGGCCGGGCT CGCGCCCGAC CAGGTCGGCG TCTGGGCGCC GAAGGTGGCC CTGGACCTCG ATCCAGCGTC AGTGCGAGCC CTGCGAGGTT CGAGGGAGCC CTCGGGGCGC GTCCTGGCGG TCGCCGAGTG GGGCGCTCGC AAGAACATCG AGGCCCTGGT GCGCGGGTTC GTCAGGGCTC GTGGTCGTGT CGGCCAGGGT TCGCTCGTCG TGAAGCTACG ACGGATCGAG GCCGAGAGCG CGGCGCGCTG GCTCGAGCGG ATCGTGAGCG AGGAGCGGGG TGAATTGGCG GCGATCTCGC TCGTCACCGA CGACCTGGCG CCTGCGGCGC TGCGCCAGCT CTATCTCGAT GCCGACCTCT ACTGCATGCC GACGCGTGGC GAAGGCTTCG GCCTCCCCTT CCTCGAGGCG ATGAGCTACG GGTGCGCCGT CATCGCGCCG GCCGACGGCG GTCACCGTGA CGTGGTCGAT GCGTCGCAAT GGCTCGTTCC CGGTCGCTAC GAGCCTGCGC ACGTCGATCC CGCGTCTGGC TACGCCGATA GCGGGGTCTT CCGAGGAGCC GAGTGGTTCG AGATCGATCC CGACGCCTTC GTCGAGGTTC TCGCCGAGGC GCTCAGCGAC CCGGACGCGG TGCGCTCGCG CGCCTTGGCT GCGCTCGGGC TCGCCGAGGC TGCCGCTCAG GCCTCGATCG ACGAGCACGA GCTGAACGTC GTGCGCGCGC TCTGGGAGGA CGCGGTCAGC TACGTGGATG TTCGATGA
|
Protein sequence | MRIFVEGATA HDNSYGIVNL RLAEALRARG HAVYVRPWDQ SLRGAGTSAR ELDIEPFDLG VGHADVWVRQ VWPPSFERPD AERAFVIQPF ELGAVPARWV VEAGQLDGIL VPSLFAKQTW LQGGADHRHL WVVPNGVVVP ALVESSEPNG DRLTVGYVGG AIWRKGIDIL IAGLDLLDDA TLQRIELIVK VAGHDTYYAG QSLLERELLA HPRVAARTEI IRASLSQARL DALYQRFDVL AAPYRAEGFA LPILEAMAHG VVPIVPDAGP APEFVDRSCG VLLASRPLMV GGPADEFLGP ALGPRWAIEV DPCDVGSAVA ALLEDPGARA GRARAGQERA RAWSWDRAAS ILEDVVRALD ADEAPTDASS RLLLRATRGG PQAIGALVEL GDLHGARELA AVTPGAEAVR ARLEGLAATR PDVWWGARHR APIPARAEAR SSWHAGEGDL AIVTRVARYL APLLAIGGGR VLDVGSGHGA MLGQLRSLGV RALGIELDPA RVEHLRASGF DVLEGDALEV LGTLETGSFG GAFVGHLVEH FAPQEVVTLL AELARVVRTG GVVVIQTPDP QAEGVMQQTF WLDPTHVRPY PAMTIAAMAA EAGFATVGAL ERSLAPLVTD TLVVLRRRAD APVIAPRRVA AVAPAVVVVA DPHSGFRRAS DALLGELNAM GVGVRAEPLV GPRSDRVFMH DLPIGSLASG LVGTALVART AWEARGLPRE LRRTLARYRR ILTYSHWSRD VFVEAGLAPD QVGVWAPKVA LDLDPASVRA LRGSREPSGR VLAVAEWGAR KNIEALVRGF VRARGRVGQG SLVVKLRRIE AESAARWLER IVSEERGELA AISLVTDDLA PAALRQLYLD ADLYCMPTRG EGFGLPFLEA MSYGCAVIAP ADGGHRDVVD ASQWLVPGRY EPAHVDPASG YADSGVFRGA EWFEIDPDAF VEVLAEALSD PDAVRSRALA ALGLAEAAAQ ASIDEHELNV VRALWEDAVS YVDVR
|
| |