Gene Afer_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0107 
Symbol 
ID8322160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp115009 
End bp117996 
Gene Length2988 bp 
Protein Length995 aa 
Translation table11 
GC content70% 
IMG OID644951256 
ProductMethyltransferase type 11 
Protein accessionYP_003108751 
Protein GI256370927 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCT TCGTCGAGGG GGCAACGGCC CACGACAACT CCTACGGCAT CGTGAACCTG 
CGCCTTGCCG AGGCGCTGCG CGCTCGTGGT CATGCGGTGT ACGTGCGCCC GTGGGACCAA
TCGTTGCGGG GAGCTGGCAC GAGCGCACGT GAGCTCGACA TCGAGCCCTT CGATCTCGGC
GTCGGCCACG CCGACGTCTG GGTGCGACAG GTGTGGCCGC CGTCGTTCGA GCGTCCCGAC
GCCGAGCGCG CCTTCGTCAT CCAACCCTTC GAGCTTGGCG CGGTGCCGGC GAGGTGGGTC
GTCGAGGCAG GTCAGCTCGA TGGCATCCTC GTCCCCTCAC TCTTTGCCAA GCAAACCTGG
CTCCAAGGCG GGGCGGATCA TCGCCACCTC TGGGTCGTTC CGAACGGCGT CGTCGTACCT
GCCCTCGTCG AGTCCTCAGA ACCGAACGGT GATCGCCTGA CGGTGGGCTA CGTGGGCGGC
GCCATCTGGC GCAAGGGTAT CGACATCCTC ATCGCTGGTC TCGACCTCCT CGATGACGCC
ACGCTGCAAC GGATCGAGCT CATCGTCAAG GTCGCAGGTC ATGACACCTA CTACGCCGGC
CAGTCGTTGC TCGAGCGCGA GCTGCTCGCC CATCCTCGTG TCGCCGCTCG GACGGAGATC
ATTCGCGCGA GCCTGTCGCA GGCGCGGCTC GATGCCCTCT ACCAACGCTT CGACGTGCTC
GCGGCTCCCT ACCGTGCCGA GGGGTTCGCG CTGCCGATCC TCGAGGCGAT GGCTCACGGG
GTCGTCCCGA TCGTGCCGGA CGCCGGGCCT GCGCCAGAGT TCGTCGACCG GAGCTGTGGC
GTGTTGCTCG CGAGTCGCCC CCTCATGGTC GGTGGCCCTG CCGATGAGTT CCTCGGTCCG
GCGCTCGGAC CACGGTGGGC CATCGAGGTG GACCCCTGTG ACGTCGGCTC CGCTGTGGCC
GCGCTGCTGG AGGACCCCGG CGCCCGGGCT GGGCGTGCGC GAGCTGGGCA GGAGCGAGCC
CGGGCCTGGA GCTGGGATCG CGCCGCAAGC ATCCTCGAAG ACGTCGTGAG GGCGCTGGAC
GCCGACGAGG CACCCACCGA TGCGTCGTCT CGACTCCTCC TCCGTGCGAC ACGGGGTGGT
CCGCAGGCGA TCGGTGCGCT CGTCGAGCTG GGTGACCTCC ACGGCGCCCG CGAGCTCGCT
GCGGTGACCC CAGGCGCCGA GGCGGTGCGA GCGAGACTGG AGGGGCTCGC GGCCACTCGC
CCGGACGTGT GGTGGGGTGC GCGCCATCGC GCGCCGATCC CCGCTCGGGC CGAAGCACGG
TCGTCGTGGC ACGCCGGCGA AGGCGACCTC GCCATCGTGA CGCGTGTCGC GCGCTACCTC
GCTCCACTGC TTGCGATCGG AGGCGGTCGC GTCCTCGACG TCGGGAGCGG CCATGGCGCG
ATGCTCGGTC AGCTCCGGTC GCTCGGGGTT CGTGCACTTG GGATCGAACT CGATCCAGCG
AGAGTGGAGC ACCTGCGTGC GAGTGGGTTC GACGTCCTCG AGGGCGATGC GCTCGAGGTG
CTCGGCACCT TGGAGACGGG GAGCTTCGGC GGAGCCTTCG TGGGCCACCT CGTCGAGCAC
TTCGCGCCCC AGGAGGTCGT CACGTTGCTC GCCGAGCTCG CTCGTGTCGT TCGCACGGGT
GGCGTCGTGG TGATCCAGAC CCCGGATCCG CAGGCAGAGG GAGTCATGCA GCAGACGTTC
TGGCTGGATC CGACGCACGT GCGCCCGTAT CCGGCGATGA CGATCGCCGC GATGGCGGCC
GAGGCCGGTT TTGCCACTGT TGGGGCACTC GAGCGATCGC TCGCACCGCT CGTCACCGAC
ACGCTCGTCG TGCTGCGTCG TCGTGCCGAT GCGCCCGTCA TCGCGCCTCG GAGGGTGGCA
GCGGTGGCGC CGGCGGTGGT CGTGGTGGCC GACCCTCACA GTGGATTCCG GCGAGCCAGC
GACGCGCTCC TCGGCGAGCT CAATGCGATG GGCGTGGGCG TGCGGGCAGA GCCCCTCGTG
GGGCCGCGGT CGGACCGCGT GTTCATGCAC GATCTCCCGA TTGGTTCGTT GGCCAGCGGC
CTCGTGGGTA CGGCGCTCGT TGCGCGTACC GCGTGGGAGG CGAGGGGCCT GCCACGAGAG
CTGCGCCGTA CGCTCGCGCG CTATCGCCGC ATCCTCACCT ACTCACACTG GAGCCGCGAC
GTGTTCGTCG AGGCCGGGCT CGCGCCCGAC CAGGTCGGCG TCTGGGCGCC GAAGGTGGCC
CTGGACCTCG ATCCAGCGTC AGTGCGAGCC CTGCGAGGTT CGAGGGAGCC CTCGGGGCGC
GTCCTGGCGG TCGCCGAGTG GGGCGCTCGC AAGAACATCG AGGCCCTGGT GCGCGGGTTC
GTCAGGGCTC GTGGTCGTGT CGGCCAGGGT TCGCTCGTCG TGAAGCTACG ACGGATCGAG
GCCGAGAGCG CGGCGCGCTG GCTCGAGCGG ATCGTGAGCG AGGAGCGGGG TGAATTGGCG
GCGATCTCGC TCGTCACCGA CGACCTGGCG CCTGCGGCGC TGCGCCAGCT CTATCTCGAT
GCCGACCTCT ACTGCATGCC GACGCGTGGC GAAGGCTTCG GCCTCCCCTT CCTCGAGGCG
ATGAGCTACG GGTGCGCCGT CATCGCGCCG GCCGACGGCG GTCACCGTGA CGTGGTCGAT
GCGTCGCAAT GGCTCGTTCC CGGTCGCTAC GAGCCTGCGC ACGTCGATCC CGCGTCTGGC
TACGCCGATA GCGGGGTCTT CCGAGGAGCC GAGTGGTTCG AGATCGATCC CGACGCCTTC
GTCGAGGTTC TCGCCGAGGC GCTCAGCGAC CCGGACGCGG TGCGCTCGCG CGCCTTGGCT
GCGCTCGGGC TCGCCGAGGC TGCCGCTCAG GCCTCGATCG ACGAGCACGA GCTGAACGTC
GTGCGCGCGC TCTGGGAGGA CGCGGTCAGC TACGTGGATG TTCGATGA
 
Protein sequence
MRIFVEGATA HDNSYGIVNL RLAEALRARG HAVYVRPWDQ SLRGAGTSAR ELDIEPFDLG 
VGHADVWVRQ VWPPSFERPD AERAFVIQPF ELGAVPARWV VEAGQLDGIL VPSLFAKQTW
LQGGADHRHL WVVPNGVVVP ALVESSEPNG DRLTVGYVGG AIWRKGIDIL IAGLDLLDDA
TLQRIELIVK VAGHDTYYAG QSLLERELLA HPRVAARTEI IRASLSQARL DALYQRFDVL
AAPYRAEGFA LPILEAMAHG VVPIVPDAGP APEFVDRSCG VLLASRPLMV GGPADEFLGP
ALGPRWAIEV DPCDVGSAVA ALLEDPGARA GRARAGQERA RAWSWDRAAS ILEDVVRALD
ADEAPTDASS RLLLRATRGG PQAIGALVEL GDLHGARELA AVTPGAEAVR ARLEGLAATR
PDVWWGARHR APIPARAEAR SSWHAGEGDL AIVTRVARYL APLLAIGGGR VLDVGSGHGA
MLGQLRSLGV RALGIELDPA RVEHLRASGF DVLEGDALEV LGTLETGSFG GAFVGHLVEH
FAPQEVVTLL AELARVVRTG GVVVIQTPDP QAEGVMQQTF WLDPTHVRPY PAMTIAAMAA
EAGFATVGAL ERSLAPLVTD TLVVLRRRAD APVIAPRRVA AVAPAVVVVA DPHSGFRRAS
DALLGELNAM GVGVRAEPLV GPRSDRVFMH DLPIGSLASG LVGTALVART AWEARGLPRE
LRRTLARYRR ILTYSHWSRD VFVEAGLAPD QVGVWAPKVA LDLDPASVRA LRGSREPSGR
VLAVAEWGAR KNIEALVRGF VRARGRVGQG SLVVKLRRIE AESAARWLER IVSEERGELA
AISLVTDDLA PAALRQLYLD ADLYCMPTRG EGFGLPFLEA MSYGCAVIAP ADGGHRDVVD
ASQWLVPGRY EPAHVDPASG YADSGVFRGA EWFEIDPDAF VEVLAEALSD PDAVRSRALA
ALGLAEAAAQ ASIDEHELNV VRALWEDAVS YVDVR