Gene Afer_0083 details

Gene Information

• Locus tag: Afer_0083
• ID: 8322131
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 84769
• End bp: 85296
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644951228
• Product: secreted repeat of unknown function
• Protein accession: YP_003108727
• Protein GI: 256370903
• COG category: [S] Function unknown
• COG ID: [COG4315] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCAAGT CCTTGCACGT CCGTTCCGTG GTTACCGTCG GGGTCTTGGC GAGCCTTGGT 
GTCGTACTGG CCGCCTGTGG GTCGACGTCG TCGACGTCTA CCTCGGCGAA GACGTCGTCC 
AGCTCTGCGA CCGTCGCCAC GTCGTCCTCG AGCTACGGCA CCATCGTGAC CTCGGGTTCG 
GGAGTCACGT ACTACGTGTT CTCGGCAGAC TCACACGATC ATTCGGCGTG CACGGGTTCG 
TGTGCCGCTG CGTGGCATCC GGTGCTCGCG ACGCACCCCA CGGTCGGTGG CTCGGCCCAG 
GCATCGCTCG TGAGCACGTT CGTGCGCCCA GGCGGAGAGC ATCAGGTCGC CTATGACGGC 
CACCCTCTCT ACACCTTCGT CGACGACTCG GGCCCCCACG TCATCAGCGG CCAAGGCATC 
AACTCGTTCG GGGGTTCCTG GCACGTGATC GCCCCGAGCG GGACCCCGAT CACCGCTGCG 
TCGAGCTCGT CGAGTTCGTC CTCGAGCGGC TATAGCAGTG GCTACTAG 

 

Protein sequence

MRKSLHVRSV VTVGVLASLG VVLAACGSTS STSTSAKTSS SSATVATSSS SYGTIVTSGS 
GVTYYVFSAD SHDHSACTGS CAAAWHPVLA THPTVGGSAQ ASLVSTFVRP GGEHQVAYDG 
HPLYTFVDDS GPHVISGQGI NSFGGSWHVI APSGTPITAA SSSSSSSSSG YSSGY