| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0082 |
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| Symbol | |
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| ID | 8322130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 83357 |
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| End bp | 84634 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644951227 |
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| Product | Histidine--tRNA ligase |
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| Protein accession | YP_003108726 |
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| Protein GI | 256370902 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCAGG TGCGTCCGTT TCGAGGAATG CGCGACATCC TCCCCGGGGA GCACGAGGTC
CGCTCTGCCG CAGCGTCTGT GATCCGCTCG ACGTACCGGT CGCACGGCTT CCTCGAGATC
GAGACCCCGA TCGTCGAAAC CCTCGAAGCA CTGGCTGCCT CCGGGGCGGG CGAGAATGCG
AAGCTGATGT TCAAGGTGCT CAAGCGCGGC GAGCGTCTCG ACCTCGGGTC CGCCTCGAGC
CCCGACGACC TCGTCGATGC GGGCCTGCGA TTCGACCTCA CGGTGCCGCT CGCTCGCTTC
TACGCCGTGA ACCAGTCGAA GCTGCCCAAG CCCTTTCTTG CGATGCAGAT CGGCCCCGCC
TTTCGGGCCG AGCGTCCGCA GCGCGGCCGA CTCCGCCAGT TCGTGCAGGC GGACGCAGAC
ATCCTCGGCG AGGCGAGCTG GCTCGCCGAG GTCGAGCTGC TGATCGCCGC CACGGCGGCC
TTGCACCAGC TCGGCCTCGA GGGCTTCGAG CTGCACGTGA ACGATCGACG GGCCGTCGAG
CATGTCCTGG AGCGTCTCGA GGTGCCGGCA GATCATTGGC GCAGTGTGCT CGTCGCGCTC
GACAAGCTCG ACAAGGAGCC GCCGATCGCT GTGCGTAACG AGATGGTCGG GGCTGGGCTC
GGCGAGGAGC TCGCCGACCA CGTCCTCGCA ACGCTCGGTG ACATCGTCGA GAACGAGCAT
CCCCTCGATG TCCTCGAGAC CCTCGATGTC GATGCAAGCG TGCTCGAGAG CCTCCACGCG
ATCGCGACGC ACGTGCGGAC CTCGGTCCGG GACACGGAGG TCGTCATCGA CCCGCTCATC
GTTCGAGGGC TGGACTACTA CTCCTCGTCG GTGTTCGAGA TCGTTCACCC TCACTGGTCG
TCGTCGATCG GCGGCGGCGG GCGCTACGAC GGACTCCTCG CACGCTTCGG AGTCGACGAG
CCGGCCTGCG GTATCTCGCT TGGGTTCGAG CGCATTCTCT CCCTGCTCGA AGAGCTCGGC
ATCCACCTCG CCACGCCGCG ACGCCGCCTC ACCCTCATCT TCGACCCGAC GACTCAGATT
GCCGAGGCGT TGCGGATGGC TCGACACTTC CGTCGCGACG GCTACCTCGT AACCCTGCTC
CCACACGATC ACACGGCGCG CTCCCCGATG AAGCGCCTTG CACTCGCGGC AGAAGAACTC
AAGGCGGAAG GATCGCAGGA CTCCTTCTGG CACCTCACAC TCGGTGTCGA CGCCGAGCCG
CGTCTCCTGA TGCACTGA
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| Protein sequence | MLQVRPFRGM RDILPGEHEV RSAAASVIRS TYRSHGFLEI ETPIVETLEA LAASGAGENA
KLMFKVLKRG ERLDLGSASS PDDLVDAGLR FDLTVPLARF YAVNQSKLPK PFLAMQIGPA
FRAERPQRGR LRQFVQADAD ILGEASWLAE VELLIAATAA LHQLGLEGFE LHVNDRRAVE
HVLERLEVPA DHWRSVLVAL DKLDKEPPIA VRNEMVGAGL GEELADHVLA TLGDIVENEH
PLDVLETLDV DASVLESLHA IATHVRTSVR DTEVVIDPLI VRGLDYYSSS VFEIVHPHWS
SSIGGGGRYD GLLARFGVDE PACGISLGFE RILSLLEELG IHLATPRRRL TLIFDPTTQI
AEALRMARHF RRDGYLVTLL PHDHTARSPM KRLALAAEEL KAEGSQDSFW HLTLGVDAEP
RLLMH
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