| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0080 |
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| Symbol | |
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| ID | 8322128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 79510 |
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| End bp | 80421 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644951225 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_003108724 |
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| Protein GI | 256370900 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATCG TGGTCCCGAC AGCCCTCACC GAACTGATCA CACGCATCCC AGACGCACCG
ATCGTGACGT GGGATCCAGG GGACCCGATC GATGATCGAT TGGCCATGAC GACCTTCTTC
GTGCCGGCCT ACGCTGCCGG CGGCGCCGCC CTCGAGCCGC TCCCGCGTAT GCGTCACCTC
GAAGTCCTCC AACTCCTGAC AGCTGGCGTG GATCGTGTCG TCGGGCAGAT CGGCGAAGGC
GTCACGCTCT GCAATGCCCG CGGCGTGCAC GATGACGCGA CTGCAGAGTT GGCGGTGGCG
CTCCTCCTCG CCGCGACGCG TGGCTTGTCC GAGTTCGCCC TGGCCCAACA CGAGGGGCGG
TGGGAGCGTC GTGTCATGCC AAGCCTCGCG GGTGCGCGCG TCGCCATCAT CGGCTACGGC
GCGATTGGCC GCGCCATCGA GGCTCGCCTC GCGCCGTTCG GCGTCGAGAT CGTCCGAGTG
GCTCGTACAC CCCGGTTCAA CCCTGACGTC CTCGCCTTCG ACGAATTTGC CCCGATTCTT
CCCACGCTCG CCGGCATCGT CGTCGTGGTT CCCCTCACCG ATGCAACCAG GCACCTCATC
GACGCAGCAC TCCTTGCCAG GCTCCCCGAC GGCGCGGTCG TCGTTAACGT CGCCCGAGGC
CCAGTCGTCG ACACAGAAGC GTTGGTCGCC GAGCTCGCGA GCGGTCGGCT CCGGGCCGGT
CTCGACGTCA CCGACCCCGA ACCGCTGCCG CCTTTCCATC CGCTGTGGCA CCTACCGAAC
GTCGTGCTCA CCCCGCACGT CGGAGGAGAC GTCGCCGGCC TCGAGACGCG CGCGTCGGCG
CTCGTCGAGC GCAACGTCCG CCGCTACATG GCCGGACTTC CCCTGCTCAA CGTCGTGAGG
GGAGAGTACT GA
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| Protein sequence | MQIVVPTALT ELITRIPDAP IVTWDPGDPI DDRLAMTTFF VPAYAAGGAA LEPLPRMRHL
EVLQLLTAGV DRVVGQIGEG VTLCNARGVH DDATAELAVA LLLAATRGLS EFALAQHEGR
WERRVMPSLA GARVAIIGYG AIGRAIEARL APFGVEIVRV ARTPRFNPDV LAFDEFAPIL
PTLAGIVVVV PLTDATRHLI DAALLARLPD GAVVVNVARG PVVDTEALVA ELASGRLRAG
LDVTDPEPLP PFHPLWHLPN VVLTPHVGGD VAGLETRASA LVERNVRRYM AGLPLLNVVR
GEY
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