Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0078 |
Symbol | |
ID | 8322126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 77770 |
End bp | 78975 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644951223 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_003108722 |
Protein GI | 256370898 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAG CGAAGGGGCT CCACCACAAG GTGGTCATCA TCGGCGGAGG TTCCGCGGGC ATCACGGTGG CGGCACGCCT CCGACGAGCA GGCGAGACCG ACGTCGCGAT CATCGAGCCA TCGGAGAATC ACTACTACCA GCCACTGTGG ACCGTCGTGG GGGGAGGGCT CGCCAAGGCG AGTGAGACCG TGCGCTCCGA GGCCTCGGTC ATGCCGCGTG GCGTGAAGTG GATCCGTGAC CGGGTGGTCA CCATCGATCC GGAGAACCAG GTCGTGAGCA CCGAGAGCGA CATTCCCGTC CACTACGACT ACCTGGTCGT GTGCCCGGGT ATTCAGCTCA ATTGGGATCG AGTGCCCGGA CTCACCGAGG CGGTAGGCCA CGACGGGGTC TCGAGCAACT ACACGTTCGA TCTCGCGCCA CGCACCTGGG ACTTCATCCA GCGGACCCGC TCGGGCACGG CGGTCTTCAC CATGCCCTCG GGACCGATCA AGTGTGCCGG CGCGCCTCAG AAGATTGCCT ACCTCGCGGC GGACTACTGG CGGATCGAGG GCGTGCTCGA CAAGATCCAC GTCATCCTCG TGCTCCCTGG ACCGACGATG TTCGGCGTGC CGGTGTGGGC GAAGGAGCTC GAGAAGGTCG TTGCGCGCTA CGGCATCGAT GTTCGGTTCC AATCGGAGAT GGTGGAGATC GACGGCACCA AGCGCGAGGT CGTCATCTCC GACAACAAGG AGGGCACCAA GGAGACCATC TCCTACGACT TCCTCCATGC CGTACCGCCG CAGAGCGCTC CTGACTGGTT GAAGGCGACG CCTCTGTCCG ACGGGACGCC AGGCGGCTGC GTCGAGGTCA ACAAGGAGAC GCTGCAGCAC GTGCGCTATC CCAACGTGTT CGCCCTCGGC GACGCCGGCA ACACGCCCAA CGCCAAGACC GGTGCCGCCG TACGCAAGCA GGCACCCGTC GTGGTCGCGA ACCTAAAGGC AGTGATGGCA GGGCGCACAC CCGAAGCGCA CTACGACGGT TACGGGTCGT GCCCGCTCGT GACCGCTCGC AACCGCATGC TGCTCGCCGA GTTCGACTAC ACCGGCAATC CGCACCCGAC CGTGCCGCTG ATCGACACGA CGAAGGAGCA CTACTCAATG TGGTTGCTCA AGCGCTACGG ACTGCCCGCG CTCTACTGGC ACGGGATGCT CAAGGGCATC GCCTAG
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Protein sequence | MAEAKGLHHK VVIIGGGSAG ITVAARLRRA GETDVAIIEP SENHYYQPLW TVVGGGLAKA SETVRSEASV MPRGVKWIRD RVVTIDPENQ VVSTESDIPV HYDYLVVCPG IQLNWDRVPG LTEAVGHDGV SSNYTFDLAP RTWDFIQRTR SGTAVFTMPS GPIKCAGAPQ KIAYLAADYW RIEGVLDKIH VILVLPGPTM FGVPVWAKEL EKVVARYGID VRFQSEMVEI DGTKREVVIS DNKEGTKETI SYDFLHAVPP QSAPDWLKAT PLSDGTPGGC VEVNKETLQH VRYPNVFALG DAGNTPNAKT GAAVRKQAPV VVANLKAVMA GRTPEAHYDG YGSCPLVTAR NRMLLAEFDY TGNPHPTVPL IDTTKEHYSM WLLKRYGLPA LYWHGMLKGI A
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