Gene Afer_0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0077 
Symbol 
ID8322125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp77177 
End bp77593 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content69% 
IMG OID644951222 
Producthistidine triad (HIT) protein 
Protein accessionYP_003108721 
Protein GI256370897 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAGCCG TGAGCTGTCC GTTGTGCGGC GCGGCGGCGA GTGCGCTCCG CCGTTCGACC 
CTCGCCGCGG TCGTCGCGGA TCGCTATCCG GTCGCAGCGG GCCACCTCTT GGTGCTGCCG 
CTGCGTCACT GTGGCCGGCT CGTCGATCTC GACGACGAGG AGCGAGCGGA TCTCTGGGCG 
TTGGTGCACG ACACGCTCGA TGCTCCACCG CCGGTCGTTG GTGAGGCAGA TGGCTGGACC 
GTCGGTGTGA ATGATGGAGC GGCGGCAGGC CAGGTCATCG ATCACGTCCA TGTCCACCTC 
ATTCCGAGGC GAGCTGGCGA CGTCAGCGAC CCGCGCGGTG GCGTGCGCTG GGTCCTTGGG 
GCGAAGGCGC CGTGGTGGGA CGACGTCGGA GTCGACGACG CCTCGCGTCA CCGTTGA
 
Protein sequence
MRAVSCPLCG AAASALRRST LAAVVADRYP VAAGHLLVLP LRHCGRLVDL DDEERADLWA 
LVHDTLDAPP PVVGEADGWT VGVNDGAAAG QVIDHVHVHL IPRRAGDVSD PRGGVRWVLG 
AKAPWWDDVG VDDASRHR