Gene Afer_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0052 
Symbol 
ID8322099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp50613 
End bp51218 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content64% 
IMG OID644951200 
Productdeoxycytidine triphosphate deaminase 
Protein accessionYP_003108700 
Protein GI256370876 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0717] Deoxycytidine deaminase 
TIGRFAM ID[TIGR02274] deoxycytidine triphosphate deaminase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTCT CTGACCGCTC GCTCCGCGAC GCCCTCGCGG CTGGTCGGAT CTCGGTCGAT 
CCGCTCTCGC CCGGTGCCAT CCAGCCGTCA TCGATCGACC TGCGGCTCGA TGCACTCTTT 
CGGGTGTTCC GCAACTACTC AGCCGGCCAC CTCGACCTTG CTGCCATTCC CGACGACTTG 
ACCGAGCTCG TCGAGGTCCC CTTCGGGCGA GCGTTCATGC TCCATCCCGG CGAGTTCGTG 
CTCGGCTCGA CGATCGAGCA CGTGCGCGTC GGCGAGGATC TCGTCGCACG ACTCGAGGGC 
AAGTCGTCCC TCGGACGCCT CGGTCTTCTG ATCCACTCGA CCGCTGGCTT CATCGATCCC 
GGCTTCGAAG GCCACGTCAC CCTGGAACTC TCGAACGTTG CTCAGCTTCC GATCACGCTC 
TATCCCGGCA TGCGGGTCGG GCAGATCTCG TTCTTGCAGA TGACGAGCCC TGCCGAGCAC 
CCCTACGGTA GTGCCGCACT GGCCTCGAAG TACCAGGGTC AACGCGGCCC GACGCCGTCT 
CGTTACCACC TCGATCACGA CGACATCAAG GGCGACCGCC GCCACCACGA AGCTACTGAG 
TGGTAA
 
Protein sequence
MILSDRSLRD ALAAGRISVD PLSPGAIQPS SIDLRLDALF RVFRNYSAGH LDLAAIPDDL 
TELVEVPFGR AFMLHPGEFV LGSTIEHVRV GEDLVARLEG KSSLGRLGLL IHSTAGFIDP 
GFEGHVTLEL SNVAQLPITL YPGMRVGQIS FLQMTSPAEH PYGSAALASK YQGQRGPTPS 
RYHLDHDDIK GDRRHHEATE W