| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0041 |
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| Symbol | |
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| ID | 8322088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 41325 |
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| End bp | 43082 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644951189 |
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| Product | replicative DNA helicase |
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| Protein accession | YP_003108689 |
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| Protein GI | 256370865 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0305] Replicative DNA helicase |
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| TIGRFAM ID | [TIGR00665] replicative DNA helicase
[TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGCT CGCAAGGGCC CGAGGATCGG CTGCCGCCGC ACAACATCGA GGCCGAGGAG
TCGCTCCTCG GGGCCATGCT GCTGTCGCGA GAAGCGATCG GGGACGCCGT CGAACTCGTC
GAAGCCGACG ACTTCTTTCG ACCGTCACAC CGAGAGCTCT TTCGCGTCCT CGCTGACCTC
TACGCCCGCG GTGAGACCAC GGACCCGGTC TCGGTGGGCG ACGAACTCCG TCGCCTGGGC
ATCGAGGAGG CGCTCGGTGG TCAAGAGGGG CTGAACCGTC TGGTCATCCA GACCCCAGCC
ATCGCGTCCG CCGGGCGCTA CGCCCAGATC GTCCGCGACT ACGGGATCCT TCGGCGCCTC
ATCCGGACCG CCTCTGACAT CGCCGAGGAG GCCTACGGCC TCCCGAAGGA CGTACGCGCG
CTGCTCGATC ACGCCGAGGC CAGCATCCTG AACGTCGCGC GGGGCACGAG TCACGAGTCC
GCGGCGCACC TCGAGCAGGT GCTGATGGAG GTCCTCGAGC AGCTCGAGCA GGTCGCCGGC
TCCGACGATC TGGGCGCCTT CGCCGTCCCG ACCGGCTTTC GCGACCTCGA TGAGCTGCTC
ACGGGCTTGC ATCGATCGAA CCTCATCATC GTCGGTGCTC GACCGGGCAT GGGCAAGACG
TCCTTCGCGC TCTCGATGGC GCTGAACGTC GCCCGCAACC AGAGCGAGCC CGTCCTGCTG
TTCTCGCTCG AGATGAACCG CATCGAGCTC GGCCAGCGGC TGGTCGCGTC GCAGGCGCGC
GTCAATTCGC AACGCCTCCG CTCCGGCCGT CTGAACGAAC GCGAGTGGGA TCAGGTCTCC
AACGCCGCCG GCGAACTCGC CACGCGCCCG ATCCTCATTG ATGACGACCC GAACCTGACC
GTCCTCGACC TCCGCACGCG CGCGCGGCGT ATCAAGGCCG AGCAAGGACT CTCGCTCGTC
GTCATCGACT ACCTCCAGCT GATGAGCAGT CGACGCCAGA GCGAGTCACG GCAGCTCGAG
GTCTCCGAGA TCTCCCGTGG CCTCAAGCTG CTCGCCCGCG AGCTCGACGT GCCGATCATC
GCGCTCTCCC AGCTGTCGCG CAACCTCGAA TCACGCAGCG ATCGTCGCCC GCAACTCGCG
GACCTCCGCG AGTCCGGTTG CCTCTCGTGG GACGCCAAGG TACGCCTCGC CGACGGTACC
GAGGTTCCCA TCGGCATGCT CTGGAGCAAG GGGGCGAGAT CCGTTCCGCT CGCATCCGTC
ACCCCCGAGG GCGTGCCGAC GGTCGCCATG GGTACACGCG TCGTGGCCAC CGGCCTCAAG
CCACTGCGAC GCCTGACCCT CGCCAACGGC TCGATCCTCC GCGCGACCGG CAATCACCCG
ATCGCCACAT CGTCGGGATG GCGGGAGGCC GGGACCCTCG TATCCGGCGA CGTGGTCCAC
GTCCTCCTGG ATGCGACTAC GGTGGCGACG ACCGTCGTCG AGTCGGTCGA CGAACTCGGC
ACGGAGCTCG TCTTCGATAT CGAGGTACCC GAGACGCATG CGTTCGTCGC CGACGGCGTC
ATCGTGCACA ACTCTCTCGA GCAAGACGCC GACGTGGTCA TGTTCATCTA CCGAGACGAG
CTGTACCACC CCGACACCAC CGATCGCGGC GTCGCCGAGA TCATCGTCGC CAAGCACCGC
AACGGTCCCC AGGGCACCGT CAACCTGGCC TTCATCGCCG ACTGGACCCG CTTCGCAGAT
ATCGCGCCCA GCGACTAG
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| Protein sequence | MARSQGPEDR LPPHNIEAEE SLLGAMLLSR EAIGDAVELV EADDFFRPSH RELFRVLADL
YARGETTDPV SVGDELRRLG IEEALGGQEG LNRLVIQTPA IASAGRYAQI VRDYGILRRL
IRTASDIAEE AYGLPKDVRA LLDHAEASIL NVARGTSHES AAHLEQVLME VLEQLEQVAG
SDDLGAFAVP TGFRDLDELL TGLHRSNLII VGARPGMGKT SFALSMALNV ARNQSEPVLL
FSLEMNRIEL GQRLVASQAR VNSQRLRSGR LNEREWDQVS NAAGELATRP ILIDDDPNLT
VLDLRTRARR IKAEQGLSLV VIDYLQLMSS RRQSESRQLE VSEISRGLKL LARELDVPII
ALSQLSRNLE SRSDRRPQLA DLRESGCLSW DAKVRLADGT EVPIGMLWSK GARSVPLASV
TPEGVPTVAM GTRVVATGLK PLRRLTLANG SILRATGNHP IATSSGWREA GTLVSGDVVH
VLLDATTVAT TVVESVDELG TELVFDIEVP ETHAFVADGV IVHNSLEQDA DVVMFIYRDE
LYHPDTTDRG VAEIIVAKHR NGPQGTVNLA FIADWTRFAD IAPSD
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