| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0035 |
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| Symbol | |
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| ID | 8322082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 35856 |
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| End bp | 36818 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644951183 |
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| Product | proline-specific peptidase |
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| Protein accession | YP_003108683 |
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| Protein GI | 256370859 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0847997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACCTGC ACGACTATCT CGACGCGCGC ACCCGCGACG ACGCTCTCTC GGGTGGTGCC
CGCCGCATCC CGATCCACAC GCCTCGAGGG ACCTTCTCGG TGTGGACCAA GCGAGTGGGC
AACGCCCCTG ACCTGCGAGT CCTGCTGCTC CACGGCGGTC CCGGCGCGAC GAGCGAGTAC
TTCGAGTGCT TCGACAGCTA CCTGCCGCTC GCTGCGATCG AGTACATCTA CTACGACCAG
CTCGGCTGCG GCCGCAGCGA CCGTCCCGAC GACCCCAGCC TCTGGACACT CGATCGCTAC
GTCGACGAGG TGGAACAGGT TCGACGAGCC CTCGGCCTCG ACGCGTCCAA CTTCGTGCTG
CTCGGGCACT CCTGGGGAGG CATCCTCGCC ATGGAGTACG CCATCCGACA CGGCGACACG
CTCCGAGGGC TGGTCATCTC CAACATGATG GCGAGTGCTC CCGCCTACAA CCGTTACGCC
GACGAGGTCC TCATCCCGGC CCTCGACCCA GCGATCGTCG CCGAAGCACG AGCGCTCGAG
GCCGCCGGCG ACACCGAGAG CGGCCGCTAC GAGGAACTGC TCATGGGGAG CTACTACCTC
GAACACACGC TGCGCATGCC GCTCGACGAG TGGCCCGAGC CGGTGGTACG CGCCTTCGCC
CACACCAATC GCGACATCTA CGTGCCGATG CAGGGCCCGA GCGAGATGGG CATGGCGGGC
GACGCCTCGC TGAAGGACTG GGATCGCTTC GACGATCTGG TATCCATCGA GGTGCCGACG
CTCGTCATCG GCGCGACTCA TGACACCATG GACCCGGACC ACATGCGCCA GATGGCAGAG
CGTCTCCCGC AGGGCCAGTT CCTCCTATGT CCGAACGGGA GCCACATGTG CATGTACGAC
GACCAGGCGA CCTACATGGC GGGGCTCATC GAGTTCCTCA CCGCACTGCG CGAGAGGGCG
TAG
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| Protein sequence | MDLHDYLDAR TRDDALSGGA RRIPIHTPRG TFSVWTKRVG NAPDLRVLLL HGGPGATSEY
FECFDSYLPL AAIEYIYYDQ LGCGRSDRPD DPSLWTLDRY VDEVEQVRRA LGLDASNFVL
LGHSWGGILA MEYAIRHGDT LRGLVISNMM ASAPAYNRYA DEVLIPALDP AIVAEARALE
AAGDTESGRY EELLMGSYYL EHTLRMPLDE WPEPVVRAFA HTNRDIYVPM QGPSEMGMAG
DASLKDWDRF DDLVSIEVPT LVIGATHDTM DPDHMRQMAE RLPQGQFLLC PNGSHMCMYD
DQATYMAGLI EFLTALRERA
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