| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0028 |
|---|
| Symbol | |
|---|
| ID | 8322074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 30309 |
|---|
| End bp | 31151 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644951175 |
|---|
| Product | degV family protein |
|---|
| Protein accession | YP_003108676 |
|---|
| Protein GI | 256370852 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTCG TCGTCGTTGC GGATTCAGCG AGTGATCTTC CTGCCGGGGT GGCAGAGGCG
CTCGGTGTGC AGATCGTGCC GCTCACCATC GAGGTCGGTG GTCGGGACTG GGCCGACGGC
ACCGAGCTCC CGCGCGAGCG TTTCTGGGAG CTCCAGGCGG CCCAGTCGGA GCTGCCGAAG
ACCGCGGCCC CATCGTCGGC GCAGTTCGCG GCCGTCTTCG AACGCGCGCT CGGTGAGGGC
GCTGAAGGCG TGGTGGCCAT CACCTTGACG CGCAAGCTCT CCGCGACCTT CCAGGCTGCC
GAGCACGCCT CGCGAGACTA TGGCGGTCGG GTGCGGGTGA TCGACTCCGA GACCCTCACC
CTCACAGAAG GCCTGATCGT CGAGGAAGCA GCACGCCTCG CTGCGAGCGG TGCGGATCTC
GAGGAGGTCG CGGCAGCGGT CGAGGACGTG AAGACGCGCG CGAGAACCCG TGGCACCCTC
GACACGCTCG AGAACCTCCG CCGAGGCGGA CGCATCGGCG CGGCAGCAGC GCTGCTCGGC
ACGGTGATGT CGTTCAAGCC AATGATCGAC ATCACCGACG GCGAGGTGAA GCCGGGCGGT
CGCCAGCGCA CGCGGCGTCG AGCGATCGAC GATCTCGTCG ACTGGGTCGA GGGCCTCGGT
CCGCTGACGC GGCTCGGCGT CGTGCACGCG CTCGCTGACG ACGTCGACGA GGTCGTCGAG
CGCGTCGCTC GCGCAGCGGC AGTCGATCCC GCCACGGTGG CAGTTGCGGT GATGGGTGCG
ACGATCGGCA CCCACGCCGG TCCACGAGCA CTTGGAGTCT CCGCTCTCGT GGCCTCCAGG
TAG
|
|---|
| Protein sequence | MSVVVVADSA SDLPAGVAEA LGVQIVPLTI EVGGRDWADG TELPRERFWE LQAAQSELPK
TAAPSSAQFA AVFERALGEG AEGVVAITLT RKLSATFQAA EHASRDYGGR VRVIDSETLT
LTEGLIVEEA ARLAASGADL EEVAAAVEDV KTRARTRGTL DTLENLRRGG RIGAAAALLG
TVMSFKPMID ITDGEVKPGG RQRTRRRAID DLVDWVEGLG PLTRLGVVHA LADDVDEVVE
RVARAAAVDP ATVAVAVMGA TIGTHAGPRA LGVSALVASR
|
|---|
| |