Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0026 |
Symbol | |
ID | 8322072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 26927 |
End bp | 28705 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644951173 |
Product | hypothetical protein |
Protein accession | YP_003108674 |
Protein GI | 256370850 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGGCC GGATCACTAG TCGTCTCGTC CTCCTCCTCG CCCTCGTCGT GCTGGGTGTG TGGTTGCCCA GGGGCGCAGC GCTCGTCAGT ACCGCGCGGG AGGCCGTGAC CGTGGTCTCG GCGCCCGGCG TCGTCGTCGG CTCGCAGCCG ATCGCGGCGA CCTTTCGCCT CGCGCATCGT CTCCACGACG CGGAGGCTTT CTTCGTCGTC TATCCCGCCA CGACGTCGGT GAGCGGCCTT GGTGCGGTGC TCTCGGGCGC ACAGCTCGGG TACCCGATCG GGATCACCCA CGCCGTCGCC GTGTCCCCGC ACGCCTCCCA GATGCACCTG GTGGTGCCAG ACCCGATCCC TGCCAGCGGC TGTGGCACGA GCTGCAGCGG CGTCTACCCG GTGCAGCTTC GGGTCGCGAG CGCGGTGAGC GGGCAGACCC TGGCGTCCGT GACGTTCGCG GTGCCGTACT TCTCGACGCT GAGCGGCGTC GTTCCGCTGC ACCTCGCCGT CGGGGTCATC GCCGAGACCC CTGCCGTGAC AGCGTCGGCG ATCGAGGAAC TCCTCGCCCG AGACCCGAGC GTCCAGGTCG GAGTGAGCGC CGAAGGCCCG GTTGGCCTCG GAGCGCTGCG CTCGCTCGCG CACGCCGTGC CTCTTCGTGC ATCTCTGCTC GCGCCCACCG TTGGCGTCGC ACGCGCGTGT GTGGGGGCGC TCGGGCCCTT GTCGTCGTTC GCATCGTCGG TTCAGCTGGC GCGTACCGTC GTTGGCACGG CCAGCGCGCC GCTCGCGTTC GCCACCGTGC CGACGTCGGA CGAACTCGAA AGCCTCCGAG CGCTCGGTAT CCACGAGGTC ATCCTCCCGG CGTCGGCCCT TGCGTCGGCG TCGCCGGTCC TGACGCTCAG CAACGCGGTG CGCCTCGGCG CAGGTGTGGT GGCACTCGGC ACCTCTGCGA TGGTCAGCGA CGGGCTGAGC TCGGTGACGC AGCCTCTCGG GGCGCAGCTG CTCATGGCCG AACTCGCACA GGTCTACTTC GAAGCTCCCT CGAGACCTGG GCGGGTACTC GCGGGTCTCG TCGCCGTCGC GAGCGATGCG CGTATGGCGG CGTTCGCTCG CGGGTTGGCA AGCCTGGGCA GCCTCCCCTT CCTCCAGCTC TCCACCATCG ATGGCGCGAT GGCCACCGCG AGCTCGACCG TCGTTCGGCC GAACGTCGCC GCCGAGAGGG CGTGCCCGCG CCCACTCGAG GCCCTGCGCG TCGCCGCGCG TCGTGCCGCG GCCCTCGCCG AGGCTGCGCC CGGGGTCCGC CCGGAGCTCA CGGCGTTGGT GCTCGGTGCC CTGGCTCATC CCGAGGCAAG CCAGCTGGCG CGTCACGCCA TCGATCGCAC CCTGGATGCG ATCACGGTCG CCTCCGATCA GCTGACGCTC ACGAGCGCTC GCGAGACGGT GCCCATCGAC ATCACGTCGC ATCTATCGGT CCCTGCCAGC ATCCGAGTCG TGCTCGTCGA CACCAAGCTC CGGTTCCCGG AGGGCTCGAC ACGCACGGTC ACCGTGGCGT CGAAGACCGT GACGGTGCCC ATCCCTGTCG TGGCACGCAC GCTCGGGACC TCGCCGCTCC TGGTTCGCCT CGAGTCTCCC TCCGGGCAGC TCATCGGGCA GAACGTCCTC GTGGTGGACT CGACCGGTTT CTCGGTGGTG GGCGTCGTGC TGACCGGTTC GTCCGCAGCC CTGCTCGCCG TGTGGTGGGT TCGCAATCGG GGTCGGCGCC AGCGGGGCCG ACACGCGAAG CGGAGCTGA
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Protein sequence | MPGRITSRLV LLLALVVLGV WLPRGAALVS TAREAVTVVS APGVVVGSQP IAATFRLAHR LHDAEAFFVV YPATTSVSGL GAVLSGAQLG YPIGITHAVA VSPHASQMHL VVPDPIPASG CGTSCSGVYP VQLRVASAVS GQTLASVTFA VPYFSTLSGV VPLHLAVGVI AETPAVTASA IEELLARDPS VQVGVSAEGP VGLGALRSLA HAVPLRASLL APTVGVARAC VGALGPLSSF ASSVQLARTV VGTASAPLAF ATVPTSDELE SLRALGIHEV ILPASALASA SPVLTLSNAV RLGAGVVALG TSAMVSDGLS SVTQPLGAQL LMAELAQVYF EAPSRPGRVL AGLVAVASDA RMAAFARGLA SLGSLPFLQL STIDGAMATA SSTVVRPNVA AERACPRPLE ALRVAARRAA ALAEAAPGVR PELTALVLGA LAHPEASQLA RHAIDRTLDA ITVASDQLTL TSARETVPID ITSHLSVPAS IRVVLVDTKL RFPEGSTRTV TVASKTVTVP IPVVARTLGT SPLLVRLESP SGQLIGQNVL VVDSTGFSVV GVVLTGSSAA LLAVWWVRNR GRRQRGRHAK RS
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