| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0006 |
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| Symbol | |
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| ID | 8322052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 6222 |
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| End bp | 8672 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644951153 |
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| Product | DNA gyrase, A subunit |
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| Protein accession | YP_003108654 |
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| Protein GI | 256370830 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.400994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTGACG AACCCACCCC CGACGCTTCG AACGTCGAGC TCATCGAGTT GCAGGAGGAG
ATGGAGCGCT CCTTTCTGGA GTACTCCCTC TCGGTGATCA TTGCGCGAGC GCTCCCTGAC
GCGCGCGATG GTCTCAAGCC GGTGCATCGT CGCATCCTCT ACTCGATGTA CGACGCTGGC
TATCGGCCCG ATCGGCCCCA CGTGAAGTGC GCGAAGGTCG TCGGGGACGT CATGAGTCGC
TTCCACCCAC ACGGCGACGC TGCGATCTAC GACGCGCTCG TGCGCATGGC GCAGGACTTC
TCGCTGCTCC ATCCCTTGAT CGATGGGCAC GGCAACTTCG GTTCGCCCGA TCCGTCGACG
GGTCCCGCGG CGTCTCGCTA TACCGAGTGC CGCCTCGCCC CGATCGCCCT TGAGCTGCTC
GCGGGTATCG ACGAAGACAC GGTCGACTTC GTCCCGAACT ACGACTCACA GACCGTCGAG
CCGTCCGTAC TGCCGGCGCG GTTCCCGAAT CTGCTCGTCA ATGGATCACA AGGCATCGCC
GTCGGTATGG CGACCCAGAT CCCATCGCAC AACCTCGGTG AAGTGGTCGA CGCGATTGCG
TACCTCATCG ACCACCCCGA GGCCACCGTC GACGAGCTCA TGCGCTTCGT TCCGGGCCCC
GATTTTCCCA CGGGTGGCAT CATTCTCGGG CGAGATGGCA TCCGCGACGC CTACCGAACC
GGCCGGGGGA GCGTCAAGCT TCGCGCCGTG GCCACGATCG AGGAGGCTCG ATCGGGCTAC
CAGATCGTCG TCACCGAGAT TCCCTTCCAG ACCTCGGTCG AGGTGATCGC CGACAAGATT
CGCCACCTCG TCGAGGAGAA GCTGCTCGAA GGGATCCGGG ACATGAAGAA CTTCTCGGCA
GGGTCCGAGA CGCGCTTCGT GATCGAGCTC AAGCGTGACG CGAATCCGAA CGTCGTGCTC
AACAACTTGT ATCGACTGAC GCCGCTCCAG ACGAGCTTCC CGATCCAGAT GCTGGCGCTG
GTCGATGGCG CGCCGCGCAC CTTGAACCTG CTTGGCTTGT GCCAGATCTA CGTCGATCAC
CAACGCGAGG TCATTCGGCG TCGCTCCGAG TTCCGTCTCG GCAAGGCTCG AGAGCGACTC
CACATCGTCG AGGGTCTCCT CTCGTGCATC GACCAACTCG ACGCCGTGAT CGCGACCATC
CGAGCCTCTG AGGATCGTGC GGCTGCCCGT GCCGCACTCA TGGCCGAGCC GTTCGGGTTC
TCTGAGCTCC AGGCGAACCA CATCTTGGAC ATGACGCTCG GGCGCCTGAC CCGTCTCGGA
CGTGAGGAGC TCGAGGAGGA GGCGGCGACG CTCCGAGCAA CCATCGCTGA ACTCGAAGCG
ATCCTTGCCG ACGCCCAACG ACTGTCCGCG GTTGTCAAGG ACGAGATGCT CGCGGCGACT
GCCGAGTACC GCCAGGCGCG GCGGACCCGC TTCGAGGTGG ACCCGGGCGA CTTCGCCGCG
GAGGACCTCA TCGAGGACGA GCCCATCGTG GTGCTCATCA GCCGTTCCGG CTACATCAAG
GCCGTGCCCG AGTCCTCGTT CAAGGCGCAG GGCCGAGGCG GCCGAGGCGT GGTGGGGGCG
CGAGTCAAGG ACGAAGACGA GATCGCCCAC GTCATCTCGT CGTCGATGCT CTCGAGGCTG
CTGGTCTTCT CGTCGCGTGG GCGGGTCTAC CAACTCCGGG GTTACGAGCT GCCCAAGCTC
GAGCGATCGG CGCGGGGGAC GGCGCTCGTC AATCTCGTCC CGTTGGCCGA CGACGAGCGC
ATCACCTCCG TCATGGGCAC GAAGGACTTC CCCGAGGACG CTGACCTCGT GTTCTTCACG
CGCAACGGGA TGGTCAAGCG AACCGCCATG GCCGAGTACG CGCGCTCGCG TCGTGATGGG
ATCATCGCTA TCGACGTGCG AGGCGACGAC GAGCTCGTGA GCGTCGTCGT CGCGACCGAA
GAGCACGATG GCGTCGTGTT CACCAAGCGC GGCCAGGTCC TGCGCTTCCC ACTCGCTGAG
GTGCGTCGTA CCGGGCGCGC GACGGCGGGC GTTCGCTCCA TTCGCCGAGC GGACGGCGAC
TGGATCGTCG CGGGCGGGCT CATCGAAGAC GGTGTCGAGG TCCTGCTCGT CACGAGCCGC
GGTTACGGCA AGCGAACCCC CCTCGATTCG TTCCCGGTGC ACCATCGAGG CGGCGCCGGT
ATCAGAGGCA TCGGCTTGAC CGAGCGCAAG GGAGAGCTGG TCGCCGCGGC CTTCGTGAGG
CCGGAGGACG AGGTCCTCAT CGTGAGCTCG CAGGGCCAGA TGATCCGCGT GCGCATCGGC
GACATCTCCA ACCAGGGTCG CTACGCAACC GGGGTCAAGC TCATCTCGCT ACAAGCCGAG
GAGTCCGTGG CGTCCGTTGG CGTCGTGCCA GAGAGCGGTA CGGACGCATA A
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| Protein sequence | MPDEPTPDAS NVELIELQEE MERSFLEYSL SVIIARALPD ARDGLKPVHR RILYSMYDAG
YRPDRPHVKC AKVVGDVMSR FHPHGDAAIY DALVRMAQDF SLLHPLIDGH GNFGSPDPST
GPAASRYTEC RLAPIALELL AGIDEDTVDF VPNYDSQTVE PSVLPARFPN LLVNGSQGIA
VGMATQIPSH NLGEVVDAIA YLIDHPEATV DELMRFVPGP DFPTGGIILG RDGIRDAYRT
GRGSVKLRAV ATIEEARSGY QIVVTEIPFQ TSVEVIADKI RHLVEEKLLE GIRDMKNFSA
GSETRFVIEL KRDANPNVVL NNLYRLTPLQ TSFPIQMLAL VDGAPRTLNL LGLCQIYVDH
QREVIRRRSE FRLGKARERL HIVEGLLSCI DQLDAVIATI RASEDRAAAR AALMAEPFGF
SELQANHILD MTLGRLTRLG REELEEEAAT LRATIAELEA ILADAQRLSA VVKDEMLAAT
AEYRQARRTR FEVDPGDFAA EDLIEDEPIV VLISRSGYIK AVPESSFKAQ GRGGRGVVGA
RVKDEDEIAH VISSSMLSRL LVFSSRGRVY QLRGYELPKL ERSARGTALV NLVPLADDER
ITSVMGTKDF PEDADLVFFT RNGMVKRTAM AEYARSRRDG IIAIDVRGDD ELVSVVVATE
EHDGVVFTKR GQVLRFPLAE VRRTGRATAG VRSIRRADGD WIVAGGLIED GVEVLLVTSR
GYGKRTPLDS FPVHHRGGAG IRGIGLTERK GELVAAAFVR PEDEVLIVSS QGQMIRVRIG
DISNQGRYAT GVKLISLQAE ESVASVGVVP ESGTDA
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