| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0001 |
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| Symbol | |
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| ID | 8324142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 87 |
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| End bp | 1463 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644951148 |
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| Product | chromosomal replication initiator protein DnaA |
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| Protein accession | YP_003108649 |
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| Protein GI | 256370825 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCAC CCGAGGCATC GTGGGAGGCG ATCGCCCAGG CGTTCCGAAC GGCGGTCGGG
GAAGCCACGT GGCTGACGTG GTTCCGAACC CTGGCGCCCC AGGAGCTCTC CGACCAGCAG
ATCGTCCTGA CCACACCGTC ACCGCTCGCC AAGGAACGTC TCGAGACCAA GTACCGCGAC
GTGCTCGAGG ACGTGCTGAC GCCCATCATG GGAGCGCGAG TGCCTGTCGC GGTACGGGTC
CGCGCCGATG TCCCCGACGA GACACCGACC ACGGCGCATT CGCTGTTCGA CTCCTCACCC
ACATCCTCGC CCACACCGTC GCGGCGTAAC GGTCGCGGGT CCTCTTCGAC CTTCGATCCC
CGCTATACCT TCGAAGCGTT CGTCATCGGG TCCTCCAATC GCTTCGCCCA CGCCGCGGCC
CTGTCCGTGG CCGAGACGCC GGCTCGCTCC TACAACCCCC TCTTCATCCA CGGCGACGCT
GGTCTTGGCA AGACCCATCT CCTCCACGCG ATCGGCAACT ACGCCCGTGA GAACTATCCG
AACCTGCTGA CGACCTACGT TTCGACCGAG ACCTTCCTCA ACGAGTTCGT CGACGCCATC
AAGCGAAACC AGACGAGTGA GTTCAAGGCC CGCTACCGTG CGTGCGACAT CCTCCTCGTC
GACGACATCC AGTTCCTCGA GGGCAAAGAA GCGATCCAAG AAGAGTTCTT CCACACGTTC
AACACGCTCT ACGGGGCACA GAAGCAGATC GTGCTCACCT CCGACCGTCC CCCACGTGCG
CTGGCGACAC TCGAGGATCG GCTCCGAAGC CGGTTCGCCA TGGGCTTGAT CACCGACGTG
CAACCGCCCG ATCTCGAGAC GCGAGCTGCG ATCCTCCGGC GAAAAGCCGA GGATGCGGGC
GTCACCGTAC CCGCAACGGT CATCGAGTTC ATCGCCGCCT CCATCACCGA CAACATCCGA
GAGCTGGAGG GAGCACTCAC TCGGCTCGCC GCATTCTCCA CGCTCAGCCA GACCGGCATC
ACGCTGACGA TGGCCGAACA GGTGTTATCG GATCTCATCT CGCAGCACGC CACCCAACGT
CAACGCACGC CTGCCGAGGT CATCGCTGCG ACGGCGGCCT TGTTCAACCT CACCCCTGAA
GACATCACCG GCGCATCGCG CAAGCGGCCG GTCGCGGTAG CTCGCCAGAT CGCGATGTAC
GTCGTTCGCG AACTCACCGA ACTCAGCTAC CCGGAGATCG GCCGCGCCTT CGGCGGCAAG
GACCACACGA CGGTCATGCA CGCCGTCAGC CGGGTACAAG AGCTGATGCA AGAGTCTGTG
GAGATCTACG AACAGGTCGA TCAGCTCTTC AAGAGTCTTC GAGGTCCGCG GCCGTGA
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| Protein sequence | MSAPEASWEA IAQAFRTAVG EATWLTWFRT LAPQELSDQQ IVLTTPSPLA KERLETKYRD
VLEDVLTPIM GARVPVAVRV RADVPDETPT TAHSLFDSSP TSSPTPSRRN GRGSSSTFDP
RYTFEAFVIG SSNRFAHAAA LSVAETPARS YNPLFIHGDA GLGKTHLLHA IGNYARENYP
NLLTTYVSTE TFLNEFVDAI KRNQTSEFKA RYRACDILLV DDIQFLEGKE AIQEEFFHTF
NTLYGAQKQI VLTSDRPPRA LATLEDRLRS RFAMGLITDV QPPDLETRAA ILRRKAEDAG
VTVPATVIEF IAASITDNIR ELEGALTRLA AFSTLSQTGI TLTMAEQVLS DLISQHATQR
QRTPAEVIAA TAALFNLTPE DITGASRKRP VAVARQIAMY VVRELTELSY PEIGRAFGGK
DHTTVMHAVS RVQELMQESV EIYEQVDQLF KSLRGPRP
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