Gene Amir_7053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_7053 
Symbol 
ID8331274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8198464 
End bp8199663 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content75% 
IMG OID644947482 
Productdiguanylate cyclase 
Protein accessionYP_003104691 
Protein GI256381031 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGAGT GGCCGCTGTG GACGCTGCGG CGACCCGCGC TGGCCTACTG GCTCCTGGTG 
GACGCCGCCG CGCTCGCCGC CTCGGTCCTC GCGATCGTCG CCACCGAGCG GCCGACCCCC
GAGGAGATCG CCCGCTTCTC CGCCATCGCG GGCACCGCGG GCGCCGTCAT CATCGTCAGC
TCGGTGTACA GCGACCGCGT CGGCGAGATC GCCCGCAACC CGTGGGCCGC CCACCTGTCC
TACCTCACCG CGGGCCTGGT CGCGCTGCCG GGGAACCTGC TGGTCCTGCT GCTGTTCGGC
CCCGCCCTGC ACGGCCTGCT CGACCAGCGC CCCGAGGTGC ACCGCTGGCT GTTCACCCTG
TCCTCGACGG CGCTGGCGGT GTTCGGCACC CGGCTGGCCA TCGGCTGGGA GCACCCGACG
ACGGGCAGGC TGGACGTGCT GGTCCTGGGC GCCACCATGC TGCTGACGGT CCGCGCGGCG
CTGATCTCGC TCGGCCTGAA GCTGCGCAGC CCGCGCGCCC CGAGCGAGGA GGTCGTGGGC
GAGCCGATCG ACGTGGTGCT GGGCGTCGTC GCGGTCAGCA TCGGCGGCCT GATGGGGTTC
GCCGCGCTGG CGACGGCCGT GCACGCCGTG GTCGCGGGCC CGCCGCTGGC CCTGCTGGAG
CGGGCCGCCC AGCTGCCGCA CTGGCGGCGG TCGGCGCAGC GCGACGCCAA GACCGGGCTG
GCCAACGCCG CGCACTGGGA CGGCCGCGCC CGCTACGAGC TGGCCAAGGC CCGCGCCACC
GAGCGCCCGA TGGCCGTGCT GCTGCTCGAC CTCGACCACT TCAAGAAGGT CAACGACCTG
GTCGGGCACC TGGCGGGCGA CGCCGCGCTC AGCGCCGTGG CGGGCCTGCT CAACACCAGC
ACCCGGCGCG GCGACCTGGT CGGGCGGTTC GGCGGCGAGG AGTTCGTGGT GCTGCTGCCG
GACGCCGAAC CGGCCGTGGC CAGGTCGGTC GCCCAGCGGG TCAGGCACGC CATCGCCGAC
CTCCAGGTGC CGACCGTGCG CACCGACGGC CACGCCCACC TGCTCACCGG GCTGACGGTG
AGCATCGGGG TGTCGACCAC CCAGCGCTTC GGCTACGAGC TGCCCGACCT GATGGTCGCC
GCCGACTCGG CGCTGCTGGC CGCCAAGAGC TACGGGCGGA ACCTGGTCGA GATGGCCTGA
 
Protein sequence
MREWPLWTLR RPALAYWLLV DAAALAASVL AIVATERPTP EEIARFSAIA GTAGAVIIVS 
SVYSDRVGEI ARNPWAAHLS YLTAGLVALP GNLLVLLLFG PALHGLLDQR PEVHRWLFTL
SSTALAVFGT RLAIGWEHPT TGRLDVLVLG ATMLLTVRAA LISLGLKLRS PRAPSEEVVG
EPIDVVLGVV AVSIGGLMGF AALATAVHAV VAGPPLALLE RAAQLPHWRR SAQRDAKTGL
ANAAHWDGRA RYELAKARAT ERPMAVLLLD LDHFKKVNDL VGHLAGDAAL SAVAGLLNTS
TRRGDLVGRF GGEEFVVLLP DAEPAVARSV AQRVRHAIAD LQVPTVRTDG HAHLLTGLTV
SIGVSTTQRF GYELPDLMVA ADSALLAAKS YGRNLVEMA