Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_7053 |
Symbol | |
ID | 8331274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 8198464 |
End bp | 8199663 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644947482 |
Product | diguanylate cyclase |
Protein accession | YP_003104691 |
Protein GI | 256381031 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCGAGT GGCCGCTGTG GACGCTGCGG CGACCCGCGC TGGCCTACTG GCTCCTGGTG GACGCCGCCG CGCTCGCCGC CTCGGTCCTC GCGATCGTCG CCACCGAGCG GCCGACCCCC GAGGAGATCG CCCGCTTCTC CGCCATCGCG GGCACCGCGG GCGCCGTCAT CATCGTCAGC TCGGTGTACA GCGACCGCGT CGGCGAGATC GCCCGCAACC CGTGGGCCGC CCACCTGTCC TACCTCACCG CGGGCCTGGT CGCGCTGCCG GGGAACCTGC TGGTCCTGCT GCTGTTCGGC CCCGCCCTGC ACGGCCTGCT CGACCAGCGC CCCGAGGTGC ACCGCTGGCT GTTCACCCTG TCCTCGACGG CGCTGGCGGT GTTCGGCACC CGGCTGGCCA TCGGCTGGGA GCACCCGACG ACGGGCAGGC TGGACGTGCT GGTCCTGGGC GCCACCATGC TGCTGACGGT CCGCGCGGCG CTGATCTCGC TCGGCCTGAA GCTGCGCAGC CCGCGCGCCC CGAGCGAGGA GGTCGTGGGC GAGCCGATCG ACGTGGTGCT GGGCGTCGTC GCGGTCAGCA TCGGCGGCCT GATGGGGTTC GCCGCGCTGG CGACGGCCGT GCACGCCGTG GTCGCGGGCC CGCCGCTGGC CCTGCTGGAG CGGGCCGCCC AGCTGCCGCA CTGGCGGCGG TCGGCGCAGC GCGACGCCAA GACCGGGCTG GCCAACGCCG CGCACTGGGA CGGCCGCGCC CGCTACGAGC TGGCCAAGGC CCGCGCCACC GAGCGCCCGA TGGCCGTGCT GCTGCTCGAC CTCGACCACT TCAAGAAGGT CAACGACCTG GTCGGGCACC TGGCGGGCGA CGCCGCGCTC AGCGCCGTGG CGGGCCTGCT CAACACCAGC ACCCGGCGCG GCGACCTGGT CGGGCGGTTC GGCGGCGAGG AGTTCGTGGT GCTGCTGCCG GACGCCGAAC CGGCCGTGGC CAGGTCGGTC GCCCAGCGGG TCAGGCACGC CATCGCCGAC CTCCAGGTGC CGACCGTGCG CACCGACGGC CACGCCCACC TGCTCACCGG GCTGACGGTG AGCATCGGGG TGTCGACCAC CCAGCGCTTC GGCTACGAGC TGCCCGACCT GATGGTCGCC GCCGACTCGG CGCTGCTGGC CGCCAAGAGC TACGGGCGGA ACCTGGTCGA GATGGCCTGA
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Protein sequence | MREWPLWTLR RPALAYWLLV DAAALAASVL AIVATERPTP EEIARFSAIA GTAGAVIIVS SVYSDRVGEI ARNPWAAHLS YLTAGLVALP GNLLVLLLFG PALHGLLDQR PEVHRWLFTL SSTALAVFGT RLAIGWEHPT TGRLDVLVLG ATMLLTVRAA LISLGLKLRS PRAPSEEVVG EPIDVVLGVV AVSIGGLMGF AALATAVHAV VAGPPLALLE RAAQLPHWRR SAQRDAKTGL ANAAHWDGRA RYELAKARAT ERPMAVLLLD LDHFKKVNDL VGHLAGDAAL SAVAGLLNTS TRRGDLVGRF GGEEFVVLLP DAEPAVARSV AQRVRHAIAD LQVPTVRTDG HAHLLTGLTV SIGVSTTQRF GYELPDLMVA ADSALLAAKS YGRNLVEMA
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