| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_7045 |
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| Symbol | |
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| ID | 8331266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 8186431 |
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| End bp | 8187183 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644947474 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003104683 |
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| Protein GI | 256381023 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGA CCGGACTGCT GGCCGACAAG ATCACGCTCG TCACCGGGGC CAGCCGGGGC
ATCGGCGCCG CCGCCGCCCG CCTGTTCACC GCCGAGGGCG CCACCGTCGT GCTCGCCGCG
CGCAGCGAGG ACGCGCTCAA GGCCCTCGCC TCGGAACTGC CGGGTGCCTC GTACGTGGTC
ACCGACCTGG GTGACAAGGA GAGCATCGAC CACCTGGTGC GCACGGTCGT CGAGCGGCAC
GGCAGGCTCG ACGCGGCGTT CAACAACGGC GGCACGGCCA CCCCGCCGCA CCCGCTCGCG
GACGTGACCG AGGAGGACCT GGACCGGGTC GTCCAGGTCA ACTTCAAGGG CGTGTTCCAC
GCGGTGGCCG CCGAGGTCAA GGCCATGATC GCCACCGGCG GCGGGGCGAT CGTCAACACC
AGCAGCGTCG GCAGCCTGAT CGCGAACCCG GCGCTGCCCG CTTACGCGGC GGCCAAGCGG
GCGGTGAACA GCCTGACCGA GTCGGCGGCC GTCACCTACG GCGGCGCGGG CATCCGGGTG
AACGCCATCG CGCCCGGCCT GACCCGCACC GAGATGGTCG ACGACTGGGA GTCGCACGAC
CCCGGCGTGA TCGACCGGAT CGTCGCGTCC ACCCCGCTCG GCAGGGCCGC CGCGCCCGAG
GAGGTGGCGG AGGCGGCGGC CTGGCTCCTC AGCGACCGCG CCTCGTACGT GACCGGCGCG
GTGCTCCCGG TGACCGGCGG GACCGGCATC TGA
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| Protein sequence | MTKTGLLADK ITLVTGASRG IGAAAARLFT AEGATVVLAA RSEDALKALA SELPGASYVV
TDLGDKESID HLVRTVVERH GRLDAAFNNG GTATPPHPLA DVTEEDLDRV VQVNFKGVFH
AVAAEVKAMI ATGGGAIVNT SSVGSLIANP ALPAYAAAKR AVNSLTESAA VTYGGAGIRV
NAIAPGLTRT EMVDDWESHD PGVIDRIVAS TPLGRAAAPE EVAEAAAWLL SDRASYVTGA
VLPVTGGTGI
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