Gene Amir_7044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_7044 
Symbol 
ID8331265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8186032 
End bp8186406 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content72% 
IMG OID644947473 
Productanti-sigma-factor antagonist 
Protein accessionYP_003104682 
Protein GI256381022 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCTGA AGGTGAGCAA GCACCGCGTC GACCACGGCG AGGGCTCGTT CCTCGTCGCC 
GGGATCTCGG GGGTGGTCGA CCTGTTCACC TCCCCGAAGC TCTGGACGGA GCTGGTGGTC
GAGGAGATCG ACGAGGGCGC GTTCCTCGTC GTGCTGGACC TGGAGCGGGT CGAGTCGCTG
GACCACCACG GGCTCGGCGT GCTCGCCGGG GCGCTGGCCA GGGTGCGGGC CAACGGCGGC
GCGCTCGCGC TGGCCGGGGT CGGCGAGACC GTGCTGGACG CGCTGGAGCT GGCCCGCTTC
GACGAGATCA TCCCGATCGC GGACACCGTC GAGGAGGCCA TCGCGATGGC CAGCGGCGAG
GAGCCCGCGC CCTGA
 
Protein sequence
MGLKVSKHRV DHGEGSFLVA GISGVVDLFT SPKLWTELVV EEIDEGAFLV VLDLERVESL 
DHHGLGVLAG ALARVRANGG ALALAGVGET VLDALELARF DEIIPIADTV EEAIAMASGE
EPAP