Gene Amir_7028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_7028 
Symbol 
ID8331249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8167702 
End bp8168862 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content73% 
IMG OID644947457 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003104666 
Protein GI256381006 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCC TCCACCAACC CCGCCAGGTC TGGGTCACGG CGTTCGCCGC GGTGATCGCC 
TTCATGGGCA TCGGCCTCGT CGACCCGATC CTGCTGTCGA TCGCCGAAGG CCTGAACGCG
TCCCCGTCCC AGGTCACCCT CCTGTTCTCC TCCTACCTCG GCGTCCAGGT CCTCGCCATG
CTGTTCACCG GCGCGGCCAG CGCCCGGTTC GGCGCCAAGC GGACCCTCGT CGGCGGACTC
GCGCTGATCG TCGTCGCCAC CCTGCTCTGC GCCCTCGCGG GCTCGATCGG CCAGCTCATC
GGCCTGCGCG CGGTCTGGGG CCTCGGCAAC GCCTTCTTCA TCGCCACCGC CCTCTCCGTC
ATCGTCGGCG CGGCCAGCGG CGGCCAGGAG GGCGCGATCC TGCTCTACGA AGCCGCCCTC
GGGCTCGGCC TGAGCGTCGG CCCGCTGCTC GGCGCGCTCC TGGGCAGCAT CTCCTGGCGC
GGCCCGTTCC TCGGCACCGC CGTGCTCATG GCCCTCGCCC TCGTGCTCTG CGCGGTCTGG
CTCGCCGACG ACGGCAGGCG CGGCCGGGTC GGCGTGCTCG ACCCGCTGCG CGCCCTGCGC
CACCCCGGCC TGCTGCGCAC CGCCCTCGCC TCCGCGCTCT ACACCGCCGC GTTCTTCGCG
GTCCTCGCCT GGTCGCCGTT CGTGCTCGGC TGGGGCGCGG TCGAGATCGG CCTGGTCTTC
TTCGGCTGGG GCCTGTGCGT CGCGCTCTCC AGCGTCCTGC TCGCCCCGCG CCTGGCCGCC
CGCCTCGGCG AGCGCCGCGC CGCGCTGGCC GCCGTGCTCG CGTTCGCCGC GCTGATGCTC
GTCATGGCCG TGCCGGACAA GACCCTGCTG GTCGTCGCGA TCATCGTGTC CGGCCTGGTC
TCCGGCCTGC TCAACACCCT GTTCACCGGC ACCGCGATGA GCGTGAGCCC CGCGCCGAGG
CCGGTCGCCA GCGCGGGCTA CAACTTCCTG CGCTGGCTGG GCGGCGCGCT CGCCGCCACG
TTCGTCAGCC ACCTGCCGCA GCCGTTCGTC GTCGCCGCGG TCTCCTGCGC GCTGGCCGCC
GTGCTGCTCT CCTTCAAGGG CGGGGACGAG AAGGTCGTGC CCGCCGAAGC CGTGCTGGTC
GGCGAGGACG CGGTGGGTTA A
 
Protein sequence
MKFLHQPRQV WVTAFAAVIA FMGIGLVDPI LLSIAEGLNA SPSQVTLLFS SYLGVQVLAM 
LFTGAASARF GAKRTLVGGL ALIVVATLLC ALAGSIGQLI GLRAVWGLGN AFFIATALSV
IVGAASGGQE GAILLYEAAL GLGLSVGPLL GALLGSISWR GPFLGTAVLM ALALVLCAVW
LADDGRRGRV GVLDPLRALR HPGLLRTALA SALYTAAFFA VLAWSPFVLG WGAVEIGLVF
FGWGLCVALS SVLLAPRLAA RLGERRAALA AVLAFAALML VMAVPDKTLL VVAIIVSGLV
SGLLNTLFTG TAMSVSPAPR PVASAGYNFL RWLGGALAAT FVSHLPQPFV VAAVSCALAA
VLLSFKGGDE KVVPAEAVLV GEDAVG