Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_7028 |
Symbol | |
ID | 8331249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 8167702 |
End bp | 8168862 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644947457 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003104666 |
Protein GI | 256381006 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCC TCCACCAACC CCGCCAGGTC TGGGTCACGG CGTTCGCCGC GGTGATCGCC TTCATGGGCA TCGGCCTCGT CGACCCGATC CTGCTGTCGA TCGCCGAAGG CCTGAACGCG TCCCCGTCCC AGGTCACCCT CCTGTTCTCC TCCTACCTCG GCGTCCAGGT CCTCGCCATG CTGTTCACCG GCGCGGCCAG CGCCCGGTTC GGCGCCAAGC GGACCCTCGT CGGCGGACTC GCGCTGATCG TCGTCGCCAC CCTGCTCTGC GCCCTCGCGG GCTCGATCGG CCAGCTCATC GGCCTGCGCG CGGTCTGGGG CCTCGGCAAC GCCTTCTTCA TCGCCACCGC CCTCTCCGTC ATCGTCGGCG CGGCCAGCGG CGGCCAGGAG GGCGCGATCC TGCTCTACGA AGCCGCCCTC GGGCTCGGCC TGAGCGTCGG CCCGCTGCTC GGCGCGCTCC TGGGCAGCAT CTCCTGGCGC GGCCCGTTCC TCGGCACCGC CGTGCTCATG GCCCTCGCCC TCGTGCTCTG CGCGGTCTGG CTCGCCGACG ACGGCAGGCG CGGCCGGGTC GGCGTGCTCG ACCCGCTGCG CGCCCTGCGC CACCCCGGCC TGCTGCGCAC CGCCCTCGCC TCCGCGCTCT ACACCGCCGC GTTCTTCGCG GTCCTCGCCT GGTCGCCGTT CGTGCTCGGC TGGGGCGCGG TCGAGATCGG CCTGGTCTTC TTCGGCTGGG GCCTGTGCGT CGCGCTCTCC AGCGTCCTGC TCGCCCCGCG CCTGGCCGCC CGCCTCGGCG AGCGCCGCGC CGCGCTGGCC GCCGTGCTCG CGTTCGCCGC GCTGATGCTC GTCATGGCCG TGCCGGACAA GACCCTGCTG GTCGTCGCGA TCATCGTGTC CGGCCTGGTC TCCGGCCTGC TCAACACCCT GTTCACCGGC ACCGCGATGA GCGTGAGCCC CGCGCCGAGG CCGGTCGCCA GCGCGGGCTA CAACTTCCTG CGCTGGCTGG GCGGCGCGCT CGCCGCCACG TTCGTCAGCC ACCTGCCGCA GCCGTTCGTC GTCGCCGCGG TCTCCTGCGC GCTGGCCGCC GTGCTGCTCT CCTTCAAGGG CGGGGACGAG AAGGTCGTGC CCGCCGAAGC CGTGCTGGTC GGCGAGGACG CGGTGGGTTA A
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Protein sequence | MKFLHQPRQV WVTAFAAVIA FMGIGLVDPI LLSIAEGLNA SPSQVTLLFS SYLGVQVLAM LFTGAASARF GAKRTLVGGL ALIVVATLLC ALAGSIGQLI GLRAVWGLGN AFFIATALSV IVGAASGGQE GAILLYEAAL GLGLSVGPLL GALLGSISWR GPFLGTAVLM ALALVLCAVW LADDGRRGRV GVLDPLRALR HPGLLRTALA SALYTAAFFA VLAWSPFVLG WGAVEIGLVF FGWGLCVALS SVLLAPRLAA RLGERRAALA AVLAFAALML VMAVPDKTLL VVAIIVSGLV SGLLNTLFTG TAMSVSPAPR PVASAGYNFL RWLGGALAAT FVSHLPQPFV VAAVSCALAA VLLSFKGGDE KVVPAEAVLV GEDAVG
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