| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_7027 |
|---|
| Symbol | |
|---|
| ID | 8331248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 8165608 |
|---|
| End bp | 8167641 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644947456 |
|---|
| Product | protein of unknown function DUF839 |
|---|
| Protein accession | YP_003104665 |
|---|
| Protein GI | 256381005 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3211] Predicted phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGTTCC AGCTCCCCCT GATCGGCAAC CACTCGCCCA GCCGCGCGGC GCTGACCTGC
CGCTACCGCT GCGGTGACGC CTGCTTCCAC GAGGTGCCCA ACCCCACGGC AAACCCGTAC
TTCGGCGACC TCGTCAGCCG CAGGACCGCG CTCCTCGGCG GCACGGCCCT CATCGCGCTC
ACCGCCGCGC CCGCAGCAGC CGCAGCAGCC GCCGAAGCGC CCGTCGGAGC AGCCGGTCAC
CCCGCCCCGA GGGGCCTCGA CTTCACCCCC GTCGCGCCCA ACGCCGAGGA CCGCGTCGTC
GTCCCCGACG GCTACCGCCA GTCCGTGGTG ATCCGCTGGG GCGACCCGCT GTTCCCAGGC
GCCCCCGAGT TCGACTTCGA CCACCAGACC GCCGCCGCCC AGGCCCGCCA GTTCGGCTTC
AACAACGACT TCGCCGCCCT GCTCCCCCTC GACCAGCGCG AGCTGACCGG CCTGCTCGTG
GTCAACCACG AGTACACCAC CGAGCAGCTC ATGTTCCGGG GCTACGACGC CGCCAACCCC
ACCCGCGAGC AGGTCGAGAT CGCCTGGGCC GCGCACGGCC TCACCGTCGT CCGCGTCGAG
CGCTCCCCGC GCGACGGCGC CCTGCGCCCG GTGTTCTCCC GCCACAACCG CCGCATCACC
CTCGCCACCC CGTTCGAGGT GCGCGGTCCG GCGGCGGGCG GCGACCTGCT CAAGACCTCC
GCCGACCCGA CCGGAACCCG CGTGCTGGGC ACGATGAACA ACTGCGCGGG CGGCGTCACG
CCCTGGGGCA CGATCCTGTC CGGCGAGGAG AACTTCAACC AGTACTTCGC CAACGCCGAG
GCCCTGGCCG ACCCGCGCCT GTCCCGCTAC GGCGTCACCG GCTCCGCCAC CACCCGCAAG
TGGGAGCGCT TCGACCCCCG CTTCGACCTC GCCCAGGAGC CGAACGAGGT CAACCGCTTC
GGCTGGGTCG TCGAGCTCGA CCCGCACGAC CCGACCTCCA CCCCGGTCAA GCACACCGCG
CTCGGCCGCT TCAAGCACGA GTGCGCCAAC GTCCGCGTCG CGGCGGACGG CCGCGTGGTC
GCCTACTCCG GCGACGACGA GCGCTTCGAG TACGTCTACA AGTTCGTCTC CGCCAAGCGC
TTCCGCCCCG GCGACAGCAA GGCCGCGCGC AGGCACAACA TGACCCTGCT CGACGACGGG
ACCCTCTACG TCGCCCGCTT CAGCGGCGAC AGCCCGCCCG AGGAGATCGA CGGCTCCGGC
GCGCTGCCCT CGGACGGCCG GTTCGACGGG ACCGGCGAGT GGATCCCGCT GGTCTCCGGG
AACCGGTCCT TCGTGGACGG CATGACCGCC GAGGAGGTGT GCGTCTTCAC CAGGATCGCC
GCCGACCGGG TGCGCGCCAC GAGGATGGAC CGCCCCGAGG ACCTCCAGAC CCACCCGCGC
ACCGGCGTCC TGTACTGCGC GCTGAGCAAC AACACCGAGC GCGGCAAGCC CGGCAAGGAG
GGCGCGACCG AGCCGAACCC GAGGATCGAC AACCGGCACG GCCAGGTGCT GGAGCTGACC
GAGCGGCGCG ACGACCCGCT GTCCACGACC TTCGCCTGGA ACCTGTTCCT GGTGTGCGGC
GACCCGGCCG CGCCCGACAC CTACTTCGGC GGCTTCCCCA AGGACCGCGT CTCCCCCATC
TCCAGCCCCG ACAACGTCGC GTTCGACCCG CACGGCAACC TGTGGATCGC CACCGACTCC
GGCGGCGCGC TCGCGGGCCA CAACGACGGC CTCTTCGGCG TCCCCGTCGA GGGGCGGTCC
AGGGGGCACC TCAAGCAGTT CCTGACCGTG CCGCGCGGCG CGGAGACCTG CGGGCCCGTC
GTCGGGCGGC AGGTCGTGCT GGTGTGCGTG CAGCACCCCG GCGAGGTCGA CGGGGCGAGC
GCCGACAACC CGGCGTCGCA CTGGCCGGAC GGCGGCGACT CCCAGCCAAG GCCGTCCGTG
GTCGCGGTGT GGCGGGAGGA GCGCGGCAGG CTGGGCGACA TCGGCCTCGG CTGA
|
|---|
| Protein sequence | MTFQLPLIGN HSPSRAALTC RYRCGDACFH EVPNPTANPY FGDLVSRRTA LLGGTALIAL
TAAPAAAAAA AEAPVGAAGH PAPRGLDFTP VAPNAEDRVV VPDGYRQSVV IRWGDPLFPG
APEFDFDHQT AAAQARQFGF NNDFAALLPL DQRELTGLLV VNHEYTTEQL MFRGYDAANP
TREQVEIAWA AHGLTVVRVE RSPRDGALRP VFSRHNRRIT LATPFEVRGP AAGGDLLKTS
ADPTGTRVLG TMNNCAGGVT PWGTILSGEE NFNQYFANAE ALADPRLSRY GVTGSATTRK
WERFDPRFDL AQEPNEVNRF GWVVELDPHD PTSTPVKHTA LGRFKHECAN VRVAADGRVV
AYSGDDERFE YVYKFVSAKR FRPGDSKAAR RHNMTLLDDG TLYVARFSGD SPPEEIDGSG
ALPSDGRFDG TGEWIPLVSG NRSFVDGMTA EEVCVFTRIA ADRVRATRMD RPEDLQTHPR
TGVLYCALSN NTERGKPGKE GATEPNPRID NRHGQVLELT ERRDDPLSTT FAWNLFLVCG
DPAAPDTYFG GFPKDRVSPI SSPDNVAFDP HGNLWIATDS GGALAGHNDG LFGVPVEGRS
RGHLKQFLTV PRGAETCGPV VGRQVVLVCV QHPGEVDGAS ADNPASHWPD GGDSQPRPSV
VAVWREERGR LGDIGLG
|
|---|
| |