Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_7008 |
Symbol | |
ID | 8331229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 8148082 |
End bp | 8149290 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644947437 |
Product | histidine kinase |
Protein accession | YP_003104646 |
Protein GI | 256380986 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.432266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAGCGC ACCCCGCGTT CGGGGACACC CTGATCGCCG GGGTGCTCTT CATGTTCGAC CTGCTCACCC TCGCCGCCGC CGGCCTGCCG TACCAGGTCC CTGGGGAGAG CGGCGGGGTC GTGACGTCCG GGGTGTCCGG CGCGGCCTGG CTCACCGTGC TGGTGCTGAT GATCGGCCCG CTGCCGGTGC GCCGCAGGTA CCCGAGGACG ACCAGCGCCC TCATCCTGCT GGGCGCCTGG GTCCAGCTGT TCACCCACGG CACCGTGGAC GACGCGGGCG GGCTGCCGCT CCGGCCCGCC GACATGGCGC TCGCCGTCGC GCTCTACACG ATGGTCGTGT TCGTGGGCAG GCGGCCGAGC CTGCTCTACC TGGCCGCGCT GTCGGTGGGC AGCGTCCTGT GGGCGGTGAC CGCCATGGGC GGCCCCGCGG GCGTCATGAT GCTGTTCGTC ATCGCCCCGG TGTTCGGGTT CAGCTGGGCG CTGGGCGAGT TCGTCGGCGC GCGCCGCGCC TACCACTCCG AGTTGGAGCA GCGGCTCCAG CTGCTGGAGC TGGAGCGCGG GCAGCAGGCC AGGATCGCGG TGGGCGAGGA GCGGTCGCGG ATCGCCAGGG AGCTGCACGA CGTGGTGGCG CACGCGGTGA GCGTGATGGT GGTGCAGGCC GACGGCGCCG GGTACGCGAT CCGGACGCAG CCCGAGCTGG CCGAGGCCGC CGTGCGCACC ATCTCCGACA CCGGGCGGCA GGCGCTGGCC GAGCTGCGCA GGCTGCTGGG CGTGCTGCGC AGCGAGGACG GGTCCGGCAC GCAGTGGGCG CCGCAGCCGG GCGCGGGCGA CCTGCGGGAG CTGACCGAGG CGCTGCGCGC GTCCGGGCTG CCGGTGACGC TCGTGGTCGG CGGCGACCTG GGCGTGCTGC CCGCCGGGCT CGGGCTGGGC GTGTACCGGA TCGTGCAGGA GGCGCTGACC AACACGCTCA AGCACGCGGG CAGCGGGGCG AGCGCGGTGG TGCGGGTGGA CTGCGGTCCG GAGCGGGTGC TGGTCGAGGT GGTGGACGAC GGCTTCGGCA CGCCCCACGA CCTGGTGGAG CTGTCCGGCG GCAACGGGCT GATCGGGATG AGGGAGCGGG CCGGGGTGCT GGGGGGTCGG CTGGAGGCCG GGCCCAACCC CGGAGGCGGG TGGCGGGTCA GGGTCGACCT GCCGCTCGTG CCCGCGTGA
|
Protein sequence | MRAHPAFGDT LIAGVLFMFD LLTLAAAGLP YQVPGESGGV VTSGVSGAAW LTVLVLMIGP LPVRRRYPRT TSALILLGAW VQLFTHGTVD DAGGLPLRPA DMALAVALYT MVVFVGRRPS LLYLAALSVG SVLWAVTAMG GPAGVMMLFV IAPVFGFSWA LGEFVGARRA YHSELEQRLQ LLELERGQQA RIAVGEERSR IARELHDVVA HAVSVMVVQA DGAGYAIRTQ PELAEAAVRT ISDTGRQALA ELRRLLGVLR SEDGSGTQWA PQPGAGDLRE LTEALRASGL PVTLVVGGDL GVLPAGLGLG VYRIVQEALT NTLKHAGSGA SAVVRVDCGP ERVLVEVVDD GFGTPHDLVE LSGGNGLIGM RERAGVLGGR LEAGPNPGGG WRVRVDLPLV PA
|
| |