| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6987 |
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| Symbol | |
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| ID | 8331208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 8124672 |
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| End bp | 8125508 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644947417 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003104626 |
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| Protein GI | 256380966 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.776192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTGT CCAAGCGGCA GCGCGCCAAG GTCTTCCGGG GCGCGCAGTA CGCGCTGCTC
GTCGTCATCG CCGCCCTGAT CGCGGTCGTG GCGGACTGGG AGGCGATCCG CAAGTCCTTC
TTCGACGTCG AGACGGCGAA GGAGATGTTC CCCGAGGTCA TCACGACCGC GCTGGTGAAC
ACGGTCGTCT ACACCGCGCT CGGCTTCGCC GTCGGCCTGG TCGCCGGCCT GGTGCTGGCG
CTGATGAAGC TGTCGTCCGT CGGCCCGTAC CGGTGGATCG CGACGATCTA CATCGAGTTC
TTCCGCGGGG TCCCCGCGCT GCTGGTGTTC GTCGCGCTGA GCGTCGCGGT GCCGCTGGCC
TTCGGCCTGA AGTTCGACAT CTACTCGACG GCCGCCATCG CGCTCGGCGT CGTCGGCGCC
GCCTACATCG CGGAGACGAT CCGCGCGGGC ATCAAGGCCG TGCCGAAGGG GCAGCTGGAG
GCCGCGCGGT CGCTGGGCAT GTCCCAGGGG CGCACGACGG TCACCGTCGT GATCCCGCAG
GCGTTCCGGA TCATCCTGCC GCCGCTGACC AACGAGCTGA TCATGCTCAC CAAGGACTCC
TCGCTGATCA GCATCATCGG GCTGATCGCG ACCCAGCGGG AGCTGACCAA GTACGGCCGC
GAGGTGCTGA GCCAGTCGCC GACGGTGACG CCGCTGCTCA TCGCGGGCCT GTGCTACCTG
ATCATCACGC TGCCGCTGGG CTACCTGTCG CGGTGGATGG AGACGCGGGG CGCGGGCGGC
AGCCGCAGCA AGAAGGTCAG CTCGCCGGAG TCCAAGGGTC TGGGGGTGTC GGCGTGA
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| Protein sequence | MALSKRQRAK VFRGAQYALL VVIAALIAVV ADWEAIRKSF FDVETAKEMF PEVITTALVN
TVVYTALGFA VGLVAGLVLA LMKLSSVGPY RWIATIYIEF FRGVPALLVF VALSVAVPLA
FGLKFDIYST AAIALGVVGA AYIAETIRAG IKAVPKGQLE AARSLGMSQG RTTVTVVIPQ
AFRIILPPLT NELIMLTKDS SLISIIGLIA TQRELTKYGR EVLSQSPTVT PLLIAGLCYL
IITLPLGYLS RWMETRGAGG SRSKKVSSPE SKGLGVSA
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