Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6986 |
Symbol | |
ID | 8331207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 8123790 |
End bp | 8124605 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644947416 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_003104625 |
Protein GI | 256380965 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.821047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCGTC GATCCAGGCA CGCCGTGCGC GCCCTGCTTC CGGTGCTCGC CCTGGCCGCC ACCGCGACCG GGTGTGCGAC CAAGGTGGAC ACCTCCACGG GCGGTGGCAA CGAGATCAGC CTGGTCCAGG AGGGCAAGCT GGTCACCTGC ACGCACATGT CGTACGAGCC CTTCCAGTTC ACCCAGAACG GTGAGACGGT CGGGTTCGAC GTCGACCTGG TCAACCTCGT CGCCAAGGAG CTGGGCGTCA CCCAGCAGAT CTTCGACACC CCGTTCGAGA ACATCACCTC GGGCACGGTG TTCAGCACCG GCGAGTGCGA CCTGGCCGCG GCGGGCATCA CGATCACCGA GAAGCGCAAG GAAGCGATCG ACTTCTCCGA CCCGTACTTC GACGCCAGCC AGGCGCTGCT GGTCAAGAAG GACTCGGGCC TGAAGGACCT CGCGTCCCTC AAGGGCAAGG TGCTGGGCGT GCAGCAGGGC ACCACCGGCG AGGAGTACGG CAACGCGAAC GCCCAGGCCA ACGGCTACGA GGTCAAGCAG TTCGAGGACC TGCCGCTGCT GGAGACCGCC GTGCGCACCG GTTCGATCGA CGCCGCCATC AACGACAACG GCGTGCTGTT CGACTACGCC AAGAAGTTCC CCGAGACCGA GGTGACCGCC GAGTTCGACA CCGGCGAGCA GTACGGGATC GCCCTGAAGA AGGGCAACAC CGCGCTCAAC GCCAAGATCG GCGAGGTCAT CAAGAAGGCC AAGGAGAGCG GCGAGTACGA CACGATCTAC GAGAAGTGGT TCGGGAAGAA GCCGTCGAGC AACTGA
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Protein sequence | MTRRSRHAVR ALLPVLALAA TATGCATKVD TSTGGGNEIS LVQEGKLVTC THMSYEPFQF TQNGETVGFD VDLVNLVAKE LGVTQQIFDT PFENITSGTV FSTGECDLAA AGITITEKRK EAIDFSDPYF DASQALLVKK DSGLKDLASL KGKVLGVQQG TTGEEYGNAN AQANGYEVKQ FEDLPLLETA VRTGSIDAAI NDNGVLFDYA KKFPETEVTA EFDTGEQYGI ALKKGNTALN AKIGEVIKKA KESGEYDTIY EKWFGKKPSS N
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